orange1.1g042460m.g (Citrus sinensis)
GRAS

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03514 (GRAS) IPR005202 orange1.1g042460m.g T202951_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
orange1.1g042460m GRAS 374 728

Links

Other GRAS family TFs
Other Citrus sinensis TFs

20 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Ciclev10018916m.g Citrus clementina Ciclev10018916m.g N 0.925
Lus10004353.g Linum usitatissimum Lus10004353.g N 0.810
POPTR_0001s00480 Populus trichocarpa POPTR_0001s00480 N 0.795
PRUPE_ppa001561mg Prunus persica PRUPE_ppa001561mg N 0.793
cassava30062.valid.m1 Manihot esculenta cassava30062.valid.m1 N 0.784
Lus10028934.g Linum usitatissimum Lus10028934.g N 0.779
evm.TU.supercontig_29.139 Carica papaya evm.TU.supercontig_29.139 N 0.778
Cucsa.320850 Cucumis sativus Cucsa.320850 N 0.777
TCM_015991 Theobroma cacao TCM_015991 N 0.776
Cla005738 Citrullus lanatus Cla005738 N 0.774
Pm023512 Prunus mume Pm023512 N 0.773
29916.m000544 Ricinus communis 29916.m000544 N 0.772
POPTR_0003s11020 Populus trichocarpa POPTR_0003s11020 N 0.762
MDP0000275704 Malus domestica MDP0000275704 N 0.749
SapurV1A.0324s0040 Salix purpurea SapurV1A.0324s0040 N 0.748
gene31749-v1.0-hybrid Fragaria vesca gene31749-v1.0-hybrid N 0.747
Gorai.008G238300 Gossypium raimondii Gorai.008G238300 N 0.742
PK22905.1 Cannabis sativa PK22905.1 N 0.736
SapurV1A.0325s0140 Salix purpurea SapurV1A.0325s0140 N 0.720
Gorai.004G200600 Gossypium raimondii Gorai.004G200600 N 0.703