evm.TU.supercontig_29.139 (Carica papaya)
GRAS

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03514 (GRAS) IPR005202 evm.TU.supercontig_29.139 T202523_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
evm.model.supercontig_29.139 GRAS 434 796

Links

Other GRAS family TFs
Other Carica papaya TFs

22 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Pm023512 Prunus mume Pm023512 N 0.864
PRUPE_ppa001561mg Prunus persica PRUPE_ppa001561mg N 0.862
cassava30062.valid.m1 Manihot esculenta cassava30062.valid.m1 N 0.859
TCM_015991 Theobroma cacao TCM_015991 N 0.853
Lus10004353.g Linum usitatissimum Lus10004353.g N 0.853
Lus10028934.g Linum usitatissimum Lus10028934.g N 0.845
29916.m000544 Ricinus communis 29916.m000544 N 0.844
POPTR_0001s00480 Populus trichocarpa POPTR_0001s00480 N 0.839
Ciclev10018916m.g Citrus clementina Ciclev10018916m.g N 0.837
Cla005738 Citrullus lanatus Cla005738 N 0.830
Cucsa.320850 Cucumis sativus Cucsa.320850 N 0.830
MDP0000275704 Malus domestica MDP0000275704 N 0.830
gene31749-v1.0-hybrid Fragaria vesca gene31749-v1.0-hybrid N 0.825
POPTR_0003s11020 Populus trichocarpa POPTR_0003s11020 N 0.820
Gorai.008G238300 Gossypium raimondii Gorai.008G238300 N 0.817
PK22905.1 Cannabis sativa PK22905.1 N 0.817
SapurV1A.0324s0040 Salix purpurea SapurV1A.0324s0040 N 0.803
SapurV1A.0325s0140 Salix purpurea SapurV1A.0325s0140 N 0.792
orange1.1g042460m.g Citrus sinensis orange1.1g042460m.g N 0.778
Gorai.004G200600 Gossypium raimondii Gorai.004G200600 N 0.765
Gorai.003G170700 Gossypium raimondii Gorai.003G170700 N 0.762
VIT_02s0154g00400 Vitis vinifera VIT_02s0154g00400 N 0.737