CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Cucsa.360250
(
Cucumis sativus
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03514 (GRAS)
IPR005202
Cucsa.360250
T202145_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Cucsa.360250.1
GRAS
161
547
AEQLLNPCANAIVKGDATRVHHLLCVLQELASPTGDANHRLADHGLRALAYHLSSNSSSSSFSSYSSTVAPFTFASTDPRFFQRSLIKFHEVSPWFAFPNNIANSSILHILSEESNRPRNLHILDIGVSHGVQWPTLLEALTRRSGGPPPLIRLTVIAPTIEHDQNTETPFSIGPPGDNISSRLLSFAKSLNINLQINRLDIHSLQSLNSQAINKSRDEILIVCAQFRLHQLKHSAPDERQEFLENLRKMEPKAVILSENNMGCSCSKCGNFEMGFRRGVEYVWKFLDSTSAAFKGRESEERRVMEGEAAKALRNVDGEMNEEKGKWCERMRNVGFERKRFGEDTIDTARASMRRYDNNWEMRMEDKDGCVGLWWKGQPVSFCSFWN
Links
Other
GRAS
family TFs
Other
Cucumis sativus
TFs
11 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
orange1.1g008559m.g
Citrus sinensis
orange1.1g008559m.g
N
0.716
gene25548-v1.0-hybrid
Fragaria vesca
gene25548-v1.0-hybrid
N
0.703
Gorai.011G058900
Gossypium raimondii
Gorai.011G058900
N
0.725
MDP0000308434
Malus domestica
MDP0000308434
N
0.709
cassava34800.m1
Manihot esculenta
cassava34800.m1
N
0.715
POPTR_0001s16890
Populus trichocarpa
POPTR_0001s16890
N
0.716
Pm013263
Prunus mume
Pm013263
N
0.716
PRUPE_ppa022653mg
Prunus persica
PRUPE_ppa022653mg
N
0.714
SapurV1A.0002s0940
Salix purpurea
SapurV1A.0002s0940
N
0.703
TCM_029136
Theobroma cacao
TCM_029136
N
0.727
VIT_09s0002g01190
Vitis vinifera
VIT_09s0002g01190
N
0.745