CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
Bostr.26833s0299
(
Boechera stricta
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03514 (GRAS)
IPR005202
Bostr.26833s0299
T202288_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Bostr.26833s0299.1.p
GRAS
221
595
LRGLLTQCAQAVASFDQRRAAEKLKEIRSHSSSDGDGTQRLAFYFADALEARITGNISPPVSTPFPSSTTSMVDILKAYKLFVHTCPIYVTDYFAANKSIYELALKATTLHIVDFGVLYGFQWPCLLLALSKRLGGPPMLRVTGIELPQSGFRPSDRVEETGRRLKRFCDKFNVPFEFNFIAKKWESISLDEIKINPGETTVVNCIHRLQYTPDETVSLDSPRDTVLKLFRDINPDLFVFAEINGMYNSPFFMTRFREALFHFSSLFDMFDTTIQAEDEYKNRALLEKELLVRDAMSVISCEGAERFARPETYKQWRVRILRAGFKPATISKQIMKDAKEIVRKRYHRDFVIDSDNNWMLQGWKGRVIYAFSCWK
Links
Other
GRAS
family TFs
Other
Boechera stricta
TFs
17 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
scaffold_501562.1
Arabidopsis lyrata
scaffold_501562.1
N
0.759
fgenesh2_kg.8__1893__AT5G59450.1
Arabidopsis lyrata
fgenesh2_kg.8__1893__AT5G59450.1
N
0.949
SCL11
Arabidopsis thaliana
AT5G59450
N
0.941
SCL30
Arabidopsis thaliana
AT3G46600
N
0.759
Bostr.18473s0299
Boechera stricta
Bostr.18473s0299
N
0.756
Bo3g132680
Brassica oleracea
Bo3g132680
N
0.738
Bo3g132720
Brassica oleracea
Bo3g132720
N
0.734
Bo9g139410
Brassica oleracea
Bo9g139410
N
0.895
Bo1g070830
Brassica oleracea
Bo1g070830
N
0.740
Bra002564
Brassica rapa
Bra002564
N
0.917
Bra033813
Brassica rapa
Bra033813
N
0.745
Cagra.0448s0009
Capsella grandiflora
Cagra.0448s0009
N
0.726
Cagra.1317s0069
Capsella grandiflora
Cagra.1317s0069
N
0.962
Carubv10016909m.g
Capsella rubella
Carubv10016909m.g
N
0.724
Carubv10028208m.g
Capsella rubella
Carubv10028208m.g
N
0.962
Thhalv10002455m.g
Eutrema salsugineum
Thhalv10002455m.g
N
0.765
Thhalv10013016m.g
Eutrema salsugineum
Thhalv10013016m.g
N
0.927