CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Cagra.0463s0002
(
Capsella grandiflora
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03514 (GRAS)
IPR005202
Cagra.0463s0002
T202311_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Cagra.0463s0002.1.p
GRAS
152
504
LVHALLACAEAVQQNNLKLADALVKHVGLLASSQAGAMRKVATYFAEGLARRIYRIYPRDDDVALSDTLQIHFYESCPYLKFAHFTANQAILEAFAMADKVHVIDLGLNHGLQWPALIQALALRPNGPPDFRLTGIGYSLTELQEVGWKLGQLASTIGVNFEFKSIALNNLSDLKPEMLDIRSGSESVAVNSVFDLHRLLAHPGSIDKFLSTIQSIRPDIMTIVEQEANHNGLVFLDRFTESLHYYSSLFDSLEGSPSQDRVMSELFLGRQILNLVACEGEDRVERHETLNQWRNRFGSRGFKPVNIGSNAYKQASMLLALHAGADGYSVDENEGCLLLGWQTRPLIATSAWS
Links
Other
GRAS
family TFs
Other
Capsella grandiflora
TFs
23 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AFUA_3G15290
Aspergillus fumigatus
CADAFUAG00005101
N
0.000
M437DRAFT_46847
Aureobasidium melanogenum
M437DRAFT_46847
N
0.000
M438DRAFT_28326
Aureobasidium pullulans
M438DRAFT_28326
N
0.000
AUEXF2481DRAFT_27061
Aureobasidium subglaciale
AUEXF2481DRAFT_27061
N
0.000
NechaG82622
Fusarium solani
NechaG82622
N
0.000