CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Ciclev10030787m.g
(
Citrus clementina
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03514 (GRAS)
IPR005202
Ciclev10030787m.g
T202416_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Ciclev10030787m
GRAS
375
746
LRTLLTLCAQAVAANDRRNACELLKQIRQHSSSTGDGMQRMAECFADGLEARLAGSGTQIYTALITKHTSAADVLKAYHLFLAACPFRKLSNFFSNKTIMNLAEKATRLHIIDFGIMYGFQWPCLIQRLSSRPGGAPKLRITGIDLPQPGFKPAERVEETGRRLAKYAETFKVPFEFNAIAQKWDTIQIEDLNIDSGEVLVVNCLYRFRNLLDETVVVDCPRNIVLNLIRKMNPDVFVLGIVNGAHSAPFFITRFREALFFYSTLFDMLETNVPREIPERMLIEREIFGREAMNVIACEGAERIERPETYKQWQVRNMRAGFTQLPLNEEIMKMAKERVDTNYHKDFVIDEDSQWLLQGWKGRIVYALSTWK
Links
Other
GRAS
family TFs
Other
Citrus clementina
TFs
60 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
F775_27241
Aegilops tauschii
F775_27241
N
BRADI3G45230
Brachypodium distachyon
BRADI3G45230
N
GLYMA06G17980
Glycine max
GLYMA06G17980
N
MLOC_62598
Hordeum vulgare
MLOC_62598
N
LPERR02G15710
Leersia perrieri
LPERR02G15710
N
OBART02G19580
Oryza barthii
OBART02G19580
N
OB02G27300
Oryza brachyantha
OB02G27300
N
ORGLA02G0167800
Oryza glaberrima
ORGLA02G0167800
N
OGLUM02G19870
Oryza glumaepatula
OGLUM02G19870
N
BGIOSGA008381
Oryza indica
BGIOSGA008381
N
OLONG_005200
Oryza longistaminata
OLONG_005200
N
OMERI02G19460
Oryza meridionalis
OMERI02G19460
N
ONIVA03G19920
Oryza nivara
ONIVA03G19920
N
OPUNC02G17490
Oryza punctata
OPUNC02G17490
N
ORUFI02G20630
Oryza rufipogon
ORUFI02G20630
N
Pavir.Ab01874
Panicum virgatum
Pavir.Ab01874
N
Pavir.J05591
Panicum virgatum
Pavir.J05591
N
PDK_20s1433191g001
Phoenix dactylifera
PDK_20s1433191g001
N
Si016284m.g
Setaria italica
Si016284m.g
N
Sb04g005902
Sorghum bicolor
Sb04g005902
N
Traes_6AS_0D7F17F06
Triticum aestivum
Traes_6AS_0D7F17F06
N
Traes_6BL_1392D6149
Triticum aestivum
Traes_6BL_1392D6149
N
Traes_6DL_88259C187
Triticum aestivum
Traes_6DL_88259C187
N
TRIUR3_27498
Triticum urartu
TRIUR3_27498
N
GRMZM2G326783
Zea mays
GRMZM2G326783
N
GRMZM2G134439
Zea mays
GRMZM2G134439
N