CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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evm.TU.supercontig_52.33
(
Carica papaya
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03514 (GRAS)
IPR005202
evm.TU.supercontig_52.33
T202528_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
evm.model.supercontig_52.33
GRAS
154
252
LLQLLIACTEAVACRDKSYASALLSELRADALVFGSSFQRVASCFVQGLADRLAQVQPLGTIGFAAPVMNIMDNASDKKEEAFRLVYEICPHIQFDAML
evm.model.supercontig_52.33
GRAS
247
351
QFDAMLPKYDTRRAKMEQFYFVEEIKNIVSCEGPARMERHEKLDQWRRRMSRAGFQAAPIKMVAQAKQWLQENYKVCEGYTIVEEKGCLVLGWKSKPIVAASCWK
Links
Other
GRAS
family TFs
Other
Carica papaya
TFs
1 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AB05458.1
Alternaria brassicicola
AB05458.1
I
fgenesh1_pm.00771_#_437
Aspergillus carbonarius
fgenesh1_pm.00771_#_437
I
ANIA_09395
Aspergillus nidulans
CADANIAG00001182
D
EURHEDRAFT_483140
Aspergillus ruber
EURHEDRAFT_483140
I
COCMIDRAFT_92286
Bipolaris oryzae
COCMIDRAFT_92286
I
COCSADRAFT_197722
Bipolaris sorokiniana
COCSADRAFT_197722
I
COCVIDRAFT_40573
Bipolaris victoriae
COCVIDRAFT_40573
I
COCCADRAFT_31925
Bipolaris zeicola
COCCADRAFT_31925
I
e_gw1.8.42.1
Cochliobolus heterostrophus C5
e_gw1.8.42.1
I
OIDMADRAFT_40903
Oidiodendron maius
OIDMADRAFT_40903
N
SNOG_02274
Phaeosphaeria nodorum
SNOG_02274
I
PTT_02800
Pyrenophora teres
PTT_02800
I
SS1G_07091
Sclerotinia sclerotiorum
SS1G_07091
I
SETTUDRAFT_137478
Setosphaeria turcica
SETTUDRAFT_137478
I
SNOG_02274
Stagonospora nodorum
SNOG_02274
I