CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Pavir.J24604
(
Panicum virgatum
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03514 (GRAS)
IPR005202
Pavir.J24604
T203074_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Pavir.J24604.1.p
GRAS
3
395
GDAPHTLQRHAAVFADALARKLLSLVPGLLRALLSTANSGEVHLVPAARRHLFDMVPFMKLAYLTTNHAILEAMEGEKFVHVVDLSGPASNPVQWVALFHAHRARRGGPPHLRITAVHDGKEFLANMAGALARDAEALDIPFQFSAVEARLEDLDPDALRQLLRVRSGEALAISVVAQLHRLLVADDAAGRSRLHVPGSSCLTPVHIMARSSPSSFGELLERELNTRLQLSPDSPSVASSLSPQSSPAVAAKLGRFLQAVRALSPKIMVVAEPEANHNAAAFLERAAAAQRHRCAAERARVERLVLGEELRGVVAREGAERKERHERLAQWARRMEAAGMGRVGMSFAGMMEARKLLQSLGLGGSYEVVLDARGQAFLFCWHRRPLYSVSAWR
Links
Other
GRAS
family TFs
Other
Panicum virgatum
TFs
10 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
BBA_03452
Beauveria bassiana
BBA_03452
I
CCM_02166
Cordyceps militaris
CCM_02166
I
FFUJ_01862
Fusarium fujikuroi
FFUJ_01862
I
FGRRES_01638
Fusarium graminearum
FGRRES_01638
I
FOXG_11065
Fusarium oxysporum
FOXG_11065
I
FPSE_09752
Fusarium pseudograminearum
FPSE_09752
I
FVEG_09736
Fusarium verticillioides
FVEG_09736
I
GGTG_04497
Gaeumannomyces graminis
GGTG_04497
I
MAPG_08463
Magnaporthe poae
MAPG_08463
I
MYCTH_2312830
Myceliophthora thermophila
MYCTH_2312830
I
NCU05411
Neurospora crassa
NCU05411
D
estExt_Genewise1Plus.C_110569
Neurospora discreta
estExt_Genewise1Plus.C_110569
I
NEUTE1DRAFT_102079
Neurospora tetrasperma
NEUTE1DRAFT_102079
I
F503_00471
Ophiostoma piceae uamh
F503_00471
I
SMAC_04150
Sordaria macrospora
SMAC_04150
I
THITE_2124588
Thielavia terrestris
THITE_2124588
I