CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Pavir.J32327
(
Panicum virgatum
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03514 (GRAS)
IPR005202
Pavir.J32327
T203088_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Pavir.J32327.1.p
GRAS
359
730
LRTILIHCAQAVAADDRRTANELLKQIRHHSKTNGDGAQRLAHCFADGLEARLAGTGSQLYHKLVAKRTTASDMLKAYHLYLAACPFKRLSHFLSNQTILSMTKNASKVHIIDFGIYFGFQWPCLIRRLSKRDGGPPVLRITGIDVPQPGFRPTERIEETGQRLAEYAKKFGVPFEYQGIASKWETIRVEDLKVGKDEVVIVNCLYRFRNLIDETVAVDSPRNRVLNTIRQVNPAIFIHGIVNGSYSVPFFITRFREALFHFSALFDMLEATVPRDDAQRALLERDLFGREALNVIACEGSDRVERPETYKQWQVRNLRAGFVQSPLNQEIVMKAKDKVKDIYHKDFVIDEDSGWLLQGWKGRIIYAISTWK
Pavir.J32327.2.p
GRAS
359
730
LRTILIHCAQAVAADDRRTANELLKQIRHHSKTNGDGAQRLAHCFADGLEARLAGTGSQLYHKLVAKRTTASDMLKAYHLYLAACPFKRLSHFLSNQTILSMTKNASKVHIIDFGIYFGFQWPCLIRRLSKRDGGPPVLRITGIDVPQPGFRPTERIEETGQRLAEYAKKFGVPFEYQGIASKWETIRVEDLKVGKDEVVIVNCLYRFRNLIDETVAVDSPRNRVLNTIRQVNPAIFIHGIVNGSYSVPFFITRFREALFHFSALFDMLEATVPRDDAQRALLERDLFGREALNVIACEGSDRVERPETYKQWQVRNLRAGFVQSPLNQEIVMKAKDKVKDIYHKDFVIDEDSGWLLQGWKGRIIYAISTWK
Links
Other
GRAS
family TFs
Other
Panicum virgatum
TFs
36 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AATE000865
Anopheles atroparvus
AATE000865
N
ACOM037725
Anopheles coluzzii
ACOM037725
N
ACUA025367
Anopheles culicifacies
ACUA025367
N
ADIR004656
Anopheles dirus
ADIR004656
N
AFAF017839
Anopheles farauti
AFAF017839
N
AGAP005245
Anopheles gambiae
AGAP005245
N
AMAM016688
Anopheles maculatus
AMAM016688
N
ASTEI05995
Anopheles stephensi
ASTEI05995
N
CpipJ_CPIJ015576
Culex pipiens
CpipJ_CPIJ015576
N
CPIJ015576
Culex quinquefasciatus
CPIJ015576
N
GF11104
Drosophila ananassae
FBgn0088144
N
GG22741
Drosophila erecta
FBgn0114906
N
GH20629
Drosophila grimshawi
FBgn0128092
N
GH20621
Drosophila grimshawi
FBgn0128084
N
pre-lola-G
Drosophila melanogaster
FBgn0264817
N
lola
Drosophila melanogaster
FBgn0005630
D
GI20190
Drosophila mojavensis
FBgn0142926
N
GL17198
Drosophila persimilis
FBgn0154801
N
GA30442
Drosophila pseudoobscura
FBgn0264579
I
GM20517
Drosophila sechellia
FBgn0175399
N
GD25977
Drosophila simulans
FBgn0197254
N
GD25970
Drosophila simulans
FBgn0197247
N
GJ20132
Drosophila virilis
FBgn0207272
N
GK19013
Drosophila willistoni
FBgn0221011
N
GE13100
Drosophila yakuba
FBgn0230802
N
LCUP002998
Lucilia cuprina
LCUP002998
N
LLOJ008817
Lutzomyia longipalpis
LLOJ008817
N
MESCA000196
Megaselia scalaris
MESCA000196
N
PPAI004092
Phlebotomus papatasi
PPAI004092
N