CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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GTF2I
(
Pteropus vampyrus
)
GTF2I-like
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02946 (GTF2I)
IPR004212
ENSPVAG00000005365
T203494_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
GTF2I
M10621_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$TFIII_Q6_01
1.000
1.000
GTF2I
M10622_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$TFIII_Q6
1.000
1.000
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSPVAP00000005080
GTF2I-like
112
186
LRKTVEDYFCFCYGKALGKSTVVPVPYEKMLRDQSAVVVQGLPEGVAFKHPENYDLATLKWILENKAGISFIIKR
ENSPVAP00000005080
GTF2I-like
359
433
LRKQVEELFERKYAQAIKAKGPVTIPYPLFQSHVEDLYVEGLPEGIPFRRPSTYGIPRLERILLAKERIRFVIKK
ENSPVAP00000005080
GTF2I-like
464
538
LRKMVDQLFCKKFAEALGSTEAKAVPYQKFEAHPNDLYVEGLPENIPFRSPSWYGIPRLEKIIQVGNRIKFVIKR
ENSPVAP00000005080
GTF2I-like
569
643
LRKQVEEIFNLKFAQALGLTEAVKVPYPVFESNPEFLYVEGLPEGIPFRSPTWFGIPRLERIVRGSNKIKFVVKK
ENSPVAP00000005080
GTF2I-like
731
805
LKQKVENLFNEKCGEALGLKQAVKVPFALFESFPEDFYVEGLPEGVPFRRPSTFGIPRLEKILRNKAKIKFIIKK
ENSPVAP00000005080
GTF2I-like
867
941
LREQVNDLFSRKFGEAIGMGFPVKVPYRKITINPGCVVVDGMPPGVSFKAPSYLEISSMRRILDSAEFIKFTVIR
Links
Other
GTF2I-like
family TFs
Other
Pteropus vampyrus
TFs
46 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
fgenesh2_kg.4__1109__AT2G31220.1
Arabidopsis lyrata
fgenesh2_kg.4__1109__AT2G31220.1
I
BHLH10
Arabidopsis thaliana
AT2G31220
D
Cagra.6952s0001
Capsella grandiflora
Cagra.6952s0001
I
Carubv10023056m.g
Capsella rubella
Carubv10023056m.g
I