COCVIDRAFT_88516 (Bipolaris victoriae)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00046 (Homeobox) IPR001356 COCVIDRAFT_88516 T206070_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ATEG_04171
M02059_2.00 		Aspergillus terreus
BWWATKRNNN
NNNYMATWWV		 PBM
Weirauch et al.(2014)
pTH5871 		0.787 0.754
YOX1
M00058_2.00 		Saccharomyces cerevisiae
HTWAATTR
YAATTWAD		 PBM
Badis et al.(2008)
YOX1_2073 		0.638 0.526
YOX1
M01552_2.00 		Saccharomyces cerevisiae
BWWATDR
YHATWWV		 PBM
Zhu et al.(2009)
Yox1 		0.638 0.526
YOX1
M07487_2.00 		Saccharomyces cerevisiae
YTAATTWN
NWAATTAR		 PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0433.1 		0.638 0.526
YOX1
M08575_2.00 		Saccharomyces cerevisiae
YTAATTWN
NWAATTAR		 Misc
DeBoer et al.(2011)
YML027W_498 		0.638 0.526
YHP1
M02191_2.00 		Saccharomyces cerevisiae
NWWATKRNN
NNYMATWWN		 PBM
Weirauch et al.(2014)
pTH6381 		0.611 0.474
YHP1
M08423_2.00 		Saccharomyces cerevisiae
TAATTG
CAATTA		 ChIP-chip
Mathelier et al.(2014)
MA0426.1 		0.611 0.474
YHP1
M08573_2.00 		Saccharomyces cerevisiae
WNTAATTR
YAATTANW		 Misc
DeBoer et al.(2011)
YDR451C_716 		0.611 0.474
YHP1
M10797_2.00 		Saccharomyces cerevisiae Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
F$YHP1_01 		0.611 0.474
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
EUN31009 Homeodomain 55 111

Links

Other Homeodomain family TFs
Other Bipolaris victoriae TFs

121 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ALNC14_110220 Albugo laibachii ALNC14_110220 N
ALNC14_036480 Albugo laibachii ALNC14_036480 N
fgenesh1_pm.C_scaffold_10000249 Phytophthora capsici fgenesh1_pm.C_scaffold_10000249 N
fgenesh1_pg.C_scaffold_17000111 Phytophthora capsici fgenesh1_pg.C_scaffold_17000111 N
e_gw1.457.7.1 Phytophthora capsici e_gw1.457.7.1 N
PITG_20387 Phytophthora infestans PITG_20387 N
PITG_04700 Phytophthora infestans PITG_04700 N
PITG_04694 Phytophthora infestans PITG_04694 N
fgenesh_scip_prom.46568.6540 Phytophthora kernoviae fgenesh_scip_prom.46568.6540 N
fgenesh_scip_prom.46568.9529 Phytophthora kernoviae fgenesh_scip_prom.46568.9529 N
fgenesh_scip_prom.28083.5336 Phytophthora lateralis fgenesh_scip_prom.28083.5336 N
fgenesh_scip_prom.28083.12007 Phytophthora lateralis fgenesh_scip_prom.28083.12007 N
F443_08033 Phytophthora parasitica F443_08033 N
F443_15764 Phytophthora parasitica F443_15764 N
F443_15766 Phytophthora parasitica F443_15766 N
Phyra75440 Phytophthora ramorum Phyra75440 N
Phyra85808 Phytophthora ramorum Phyra85808 N
Physo142192 Phytophthora sojae Physo142192 N
Physo138014 Phytophthora sojae Physo138014 N
Physo142188 Phytophthora sojae Physo142188 N
Physo142190 Phytophthora sojae Physo142190 N
Physo142191 Phytophthora sojae Physo142191 N
maker-pag1_scaffold_526-fgenesh-gene-0.3 Pythium aphanidermatum maker-pag1_scaffold_526-fgenesh-gene-0.3 N
maker-pag1_scaffold_539-snap-gene-0.8 Pythium aphanidermatum maker-pag1_scaffold_539-snap-gene-0.8 N
maker-pag1_scaffold_785-snap-gene-0.4 Pythium aphanidermatum maker-pag1_scaffold_785-snap-gene-0.4 N
maker-par_contig_2316-fgenesh-gene-0.0 Pythium arrhenomanes maker-par_contig_2316-fgenesh-gene-0.0 N
maker-pir_contig_4474-fgenesh-gene-0.0 Pythium irregulare maker-pir_contig_4474-fgenesh-gene-0.0 N
maker-pir_contig_1338-fgenesh-gene-0.2 Pythium irregulare maker-pir_contig_1338-fgenesh-gene-0.2 N
maker-pir_contig_636-snap-gene-0.12 Pythium irregulare maker-pir_contig_636-snap-gene-0.12 N
maker-piw_contig_10342-snap-gene-0.1 Pythium iwayamai maker-piw_contig_10342-snap-gene-0.1 N
PYU1_G007486 Pythium ultimum PYU1_G007486 N
PYU1_G007487 Pythium ultimum PYU1_G007487 N
maker-pve_contig_563-fgenesh-gene-0.8 Pythium vexans maker-pve_contig_563-fgenesh-gene-0.8 N
maker-pve_contig_1305-fgenesh-gene-0.0 Pythium vexans maker-pve_contig_1305-fgenesh-gene-0.0 N