CIS-BP Database: Catalog of Inferred Sequence Binding Preferences

TF Information

ENSCJAG00000023408 *(Callithrix jacchus)* Homeodomain
Pfam ID	Interpro ID	Gene ID	CIS-BP ID	Sequence source	Animal TF db
PF00046 (Homeobox)	IPR001356	ENSCJAG00000023408	T208058_2.00	Ensembl (2018-Dec-8)	Link out
Directly determined binding motifs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
No direct experiments
Motifs from related TFs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
DUX4 M08135_2.00	Homo sapiens	TAAYYYAATCA	TGATTRRRTTA	ChIP-seq Mathelier et al.(2014) MA0468.1	0.807	0.841
DUX4 M09167_2.00	Homo sapiens	TAAYYYAATCA	TGATTRRRTTA	Misc Kulakovskiy et al.(2013) DUX4_HUMAN.H11MO.0.A	0.807	0.841
DUX4 M10757_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$DUX4_01	0.807	0.841
DUX3_HUMAN M10633_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$DUX3_01	0.698	0.752
DUX1_HUMAN M10631_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$DUX1_01	0.696	0.761
DUX1_HUMAN M10632_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$DUX1_02	0.696	0.761
For this family, TFs with SR scores > 0.599* will likely have a similar motif*

DNA Binding Domains

Protein ID	Domain	From	To	Sequence
ENSCJAP00000041901	Homeodomain	40	96	RRKRLVWTPSQRDALRASFERNPYPRMATREQLAQAIGVPEPRVQIWFQNERSRRLR
ENSCJAP00000041901	Homeodomain	115	170	RRKRTAVTQSQTAVLLRAFERERFPDFATREELAGETGLPESRIQIWFQNRRARHP

Links
Other Homeodomain family TFs
Other *Callithrix jacchus* TFs