IRX2 (Loxodonta africana)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00046 (Homeobox) IPR001356 ENSLAFG00000031893 T211117_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Irx2
M00386_2.00 		Mus musculus
NNDACAHNN
NNDTGTHNN		 PBM
Berger et al.(2008)
Irx2_0900 		0.867 1.000
Irx5
M00455_2.00 		Mus musculus
NNNDACAHN
NDTGTHNNN		 PBM
Berger et al.(2008)
Irx5_2385 		0.867 1.000
IRX2
M03212_2.00 		Homo sapiens
NDACAYRACAHN
NDTGTYRTGTHN		 SELEX
Jolma et al.(2013)
IRX2_1 		0.867 1.000
IRX5
M03222_2.00 		Homo sapiens
NDACAYRACAHN
NDTGTYRTGTHN		 SELEX
Jolma et al.(2013)
IRX5_1 		0.867 1.000
IRX5
M05315_2.00 		Homo sapiens
NBDTGTHNDACAYVN
NBRTGTHNDACAHVN		 SELEX
Yin et al.(2017)
IRX5_eDBD_HT-SELEX 		0.867 1.000
IRX5
M05316_2.00 		Homo sapiens
WYRYGHHNHAYRYRY
RYRYRTDNDDCRYRW		 SELEX
Yin et al.(2017)
IRX5_eDBD_Methyl-HT-SELEX 		0.867 1.000
ara
M06518_2.00 		Drosophila melanogaster
WWACA
TGTWW		 B1H
Mathelier et al.(2014)
MA0210.1 		0.815 0.930
ara
M06313_2.00 		Drosophila melanogaster
TGTWWWNN
NNWWWACA		 B1H
Zhu et al.(2011)
Ara_Cell_FBgn0015904 		0.815 0.930
ara
M06314_2.00 		Drosophila melanogaster
DWWACA
TGTWWH		 B1H
Zhu et al.(2011)
Ara_SOLEXA_FBgn0015904 		0.815 0.930
caup
M06519_2.00 		Drosophila melanogaster
WAACA
TGTTW		 B1H
Mathelier et al.(2014)
MA0217.1 		0.806 0.877
caup
M06315_2.00 		Drosophila melanogaster
HWDWAACA
TGTTWHWD		 B1H
Zhu et al.(2011)
Caup_Cell_FBgn0015919 		0.806 0.877
caup
M06316_2.00 		Drosophila melanogaster
NDDACA
TGTHHN		 B1H
Zhu et al.(2011)
Caup_SOLEXA_FBgn0015919 		0.806 0.877
Irx4
M00416_2.00 		Mus musculus
NNNDAMAH
DTKTHNNN		 PBM
Berger et al.(2008)
Irx4_2242 		0.780 0.877
Irx6
M00456_2.00 		Mus musculus
NNDAHWN
NWDTHNN		 PBM
Berger et al.(2008)
Irx6_2623 		0.780 0.860
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSLAFP00000027456 Homeodomain 110 169

Links

Other Homeodomain family TFs
Other Loxodonta africana TFs

387 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
CAOG_06646 Capsaspora owczarzaki CAOG_06646 I
CIMG_06399 Coccidioides immitis CIMG_06399 I
CPC735_029030 Coccidioides posadasii CPC735_029030 I
e_gw1.2.349.1 Fragilariopsis cylindrus e_gw1.2.349.1 N
fgenesh2_kg.1_#_319_#_2595_1_CCUX_EXTA Fragilariopsis cylindrus fgenesh2_kg.1_#_319_#_2595_1_CCUX_EXTA N
gw1.1.2017.1 Fragilariopsis cylindrus gw1.1.2017.1 N
gw1.2.1206.1 Fragilariopsis cylindrus gw1.2.1206.1 N
gw1.22.133.1 Fragilariopsis cylindrus gw1.22.133.1 N
PDE_09961 Penicillium oxalicum PDE_09961 I
Phatr3_J49594 Phaeodactylum tricornutum Phatr3_J49594 I
Phatr3_Jdraft1650 Phaeodactylum tricornutum Phatr3_Jdraft1650 N
HSF2 Phaeodactylum tricornutum Phatr3_J55070 N
Phatr3_J50481 Phaeodactylum tricornutum Phatr3_J50481 N
Phatr3_J48667 Phaeodactylum tricornutum Phatr3_J48667 N
Phatr3_J48361 Phaeodactylum tricornutum Phatr3_J48361 N
Phatr3_J44917 Phaeodactylum tricornutum Phatr3_J44917 N
Phatr3_J44586 Phaeodactylum tricornutum Phatr3_J44586 N
Phatr3_J43364 Phaeodactylum tricornutum Phatr3_J43364 N
Phatr3_J39785 Phaeodactylum tricornutum Phatr3_J39785 N
Phatr3_EG02471 Phaeodactylum tricornutum Phatr3_EG02471 N
Phatr3_EG01933 Phaeodactylum tricornutum Phatr3_EG01933 N
SU7_1143 Saccharomyces arboricola SU7_1143 I
HSF1 Saccharomyces cerevisiae YGL073W D
7859_YGL073W Saccharomyces mikatae 7859_YGL073W I
8607_YGL073W Saccharomyces paradoxus 8607_YGL073W I
Thaps9607 Thalassiosira pseudonana Thaps9607 N
Thaps10803 Thalassiosira pseudonana Thaps10803 N
Thaps11623 Thalassiosira pseudonana Thaps11623 N
Thaps22570 Thalassiosira pseudonana Thaps22570 I
Thaps22932 Thalassiosira pseudonana Thaps22932 N
Thaps23801 Thalassiosira pseudonana Thaps23801 N
Thaps23803 Thalassiosira pseudonana Thaps23803 N
Thaps23991 Thalassiosira pseudonana Thaps23991 N
Thaps263978 Thalassiosira pseudonana Thaps263978 N
Thaps7395 Thalassiosira pseudonana Thaps7395 N
Thaps7394 Thalassiosira pseudonana Thaps7394 N
Thaps269194 Thalassiosira pseudonana Thaps269194 N
Thaps268064 Thalassiosira pseudonana Thaps268064 N
Thaps264847 Thalassiosira pseudonana Thaps264847 N
Thaps264838 Thalassiosira pseudonana Thaps264838 N
Thaps264072 Thalassiosira pseudonana Thaps264072 N
UREG_04004 Uncinocarpus reesii UREG_04004 I
PV09_00139 Verruconis gallopava PV09_00139 I