ENSLOCG00000006946 (Lepisosteus oculatus)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00046 (Homeobox) IPR001356 ENSLOCG00000006946 T211187_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Irx4
M00416_2.00 		Mus musculus
NNNDAMAH
DTKTHNNN		 PBM
Berger et al.(2008)
Irx4_2242 		0.702 0.849
ara
M06518_2.00 		Drosophila melanogaster
WWACA
TGTWW		 B1H
Mathelier et al.(2014)
MA0210.1 		0.683 0.887
ara
M06313_2.00 		Drosophila melanogaster
TGTWWWNN
NNWWWACA		 B1H
Zhu et al.(2011)
Ara_Cell_FBgn0015904 		0.683 0.887
ara
M06314_2.00 		Drosophila melanogaster
DWWACA
TGTWWH		 B1H
Zhu et al.(2011)
Ara_SOLEXA_FBgn0015904 		0.683 0.887
Irx6
M00456_2.00 		Mus musculus
NNDAHWN
NWDTHNN		 PBM
Berger et al.(2008)
Irx6_2623 		0.682 0.887
caup
M06519_2.00 		Drosophila melanogaster
WAACA
TGTTW		 B1H
Mathelier et al.(2014)
MA0217.1 		0.674 0.830
caup
M06315_2.00 		Drosophila melanogaster
HWDWAACA
TGTTWHWD		 B1H
Zhu et al.(2011)
Caup_Cell_FBgn0015919 		0.674 0.830
caup
M06316_2.00 		Drosophila melanogaster
NDDACA
TGTHHN		 B1H
Zhu et al.(2011)
Caup_SOLEXA_FBgn0015919 		0.674 0.830
Irx2
M00386_2.00 		Mus musculus
NNDACAHNN
NNDTGTHNN		 PBM
Berger et al.(2008)
Irx2_0900 		0.671 0.849
Irx5
M00455_2.00 		Mus musculus
NNNDACAHN
NDTGTHNNN		 PBM
Berger et al.(2008)
Irx5_2385 		0.671 0.849
IRX2
M03212_2.00 		Homo sapiens
NDACAYRACAHN
NDTGTYRTGTHN		 SELEX
Jolma et al.(2013)
IRX2_1 		0.671 0.849
IRX5
M03222_2.00 		Homo sapiens
NDACAYRACAHN
NDTGTYRTGTHN		 SELEX
Jolma et al.(2013)
IRX5_1 		0.671 0.849
IRX5
M05315_2.00 		Homo sapiens
NBDTGTHNDACAYVN
NBRTGTHNDACAHVN		 SELEX
Yin et al.(2017)
IRX5_eDBD_HT-SELEX 		0.671 0.849
IRX5
M05316_2.00 		Homo sapiens
WYRYGHHNHAYRYRY
RYRYRTDNDDCRYRW		 SELEX
Yin et al.(2017)
IRX5_eDBD_Methyl-HT-SELEX 		0.671 0.849
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSLOCP00000008402 Homeodomain 122 177

Links

Other Homeodomain family TFs
Other Lepisosteus oculatus TFs

412 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
F775_16881 Aegilops tauschii F775_16881 N
NAI1 Arabidopsis lyrata fgenesh2_kg.4__198__AT2G22770.1 N
Bostr.19427s0044 Boechera stricta Bostr.19427s0044 N
Bo8g100870 Brassica oleracea Bo8g100870 I
Bo4g151030 Brassica oleracea Bo4g151030 I
Bra030207 Brassica rapa Bra030207 I
Bra039927 Brassica rapa Bra039927 I
Cagra.0882s0006 Capsella grandiflora Cagra.0882s0006 N
Carubv10023610m.g Capsella rubella Carubv10023610m.g N
Ca_05320 Cicer arietinum Ca_05320 I
Thhalv10000251m.g Eutrema salsugineum Thhalv10000251m.g N
GLYMA17G16741 Glycine max GLYMA17G16741 I
GLYMA05G23291 Glycine max GLYMA05G23291 I
Gorai.012G161900 Gossypium raimondii Gorai.012G161900 I
LPERR12G15010 Leersia perrieri LPERR12G15010 N
Lus10011578.g Linum usitatissimum Lus10011578.g I
Lus10019247.g Linum usitatissimum Lus10019247.g I
MTR_4g097940 Medicago truncatula MTR_4g097940 I
Pavir.J26871 Panicum virgatum Pavir.J26871 I
Si011709m.g Setaria italica Si011709m.g I
Si024086m.g Setaria italica Si024086m.g I
GRMZM2G036554 Zea mays GRMZM2G036554 I