fgenesh2_kg.8__392__AT5G44180.1 (Arabidopsis lyrata)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00046 (Homeobox) IPR001356 fgenesh2_kg.8__392__AT5G44180.1 T218489_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
RLT1
M02038_2.00 		Arabidopsis thaliana
NDHTCWWN
NWWGADHN		 PBM
Weirauch et al.(2014)
pTH5432 		0.680 0.737
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
fgenesh2_kg.8__392__AT5G44180.1 Homeodomain 16 72

Links

Other Homeodomain family TFs
Other Arabidopsis lyrata TFs

131 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AAEL009734 Aedes aegypti AAEL009734 N
AALB006063 Anopheles albimanus AALB006063 N
AARA002357 Anopheles arabiensis AARA002357 N
AATE011183 Anopheles atroparvus AATE011183 I
ACHR004155 Anopheles christyi ACHR004155 N
ACOM039167 Anopheles coluzzii ACOM039167 N
ACUA005687 Anopheles culicifacies ACUA005687 N
ADAC000074 Anopheles darlingi ADAC000074 N
ADIR008800 Anopheles dirus ADIR008800 N
AFAF012248 Anopheles farauti AFAF012248 N
AFUN003724 Anopheles funestus AFUN003724 N
AGAP005437 Anopheles gambiae AGAP005437 N
AMEC002483 Anopheles melas AMEC002483 N
AMEM011497 Anopheles merus AMEM011497 N
AMIN011385 Anopheles minimus AMIN011385 N
AQUA007643 Anopheles quadriannulatus AQUA007643 N
ASIS008585 Anopheles sinensis ASIS008585 I
ASTEI02063 Anopheles stephensi ASTEI02063 N
GB44084 Apis mellifera GB44084 N
BGIBMGA004336 Bombyx mori BGIBMGA004336 N
Cflo_10859--XP_001122278.1_APIME Camponotus floridanus Cflo_10859--XP_001122278.1_APIME N
CpipJ_CPIJ012178 Culex pipiens CpipJ_CPIJ012178 N
CPIJ012178 Culex quinquefasciatus CPIJ012178 N
KGM_20079 Danaus plexippus KGM_20079 I
DAPPUDRAFT_305439 Daphnia pulex DAPPUDRAFT_305439 N
YQE_08773 Dendroctonus ponderosae YQE_08773 I
Hsal_08260--XP_001122278.1_APIME Harpegnathos saltator Hsal_08260--XP_001122278.1_APIME N
HMEL013192 Heliconius melpomene HMEL013192 I
LDEC004833 Leptinotarsa decemlineata LDEC004833 I
NV14679 Nasonia vitripennis NV14679 N
PPAI003748 Phlebotomus papatasi PPAI003748 N
PPAI005039 Phlebotomus papatasi PPAI005039 N
SINV15005 Solenopsis invicta SINV15005 N
TC009211 Tribolium castaneum TC009211 I
L798_10658 Zootermopsis nevadensis L798_10658 N