GB55663 (Apis mellifera)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00046 (Homeobox) IPR001356 GB55663 T218664_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Lim1
M03853_2.00 		Drosophila melanogaster
NTAATTRN
NYAATTAN		 SELEX
Nitta et al.(2015)
Lim1_1 		0.861 0.930
Lim1
M06529_2.00 		Drosophila melanogaster
TTAATTA
TAATTAA		 B1H
Mathelier et al.(2014)
MA0194.1 		0.861 0.930
Lim1
M06332_2.00 		Drosophila melanogaster
TTAATTA
TAATTAA		 B1H
Zhu et al.(2011)
Lim1_Cell_FBgn0026411 		0.861 0.930
Lim1
M06333_2.00 		Drosophila melanogaster
HTAATTR
YAATTAD		 B1H
Zhu et al.(2011)
Lim1_SOLEXA_FBgn0026411 		0.861 0.930
Lhx1
M00405_2.00 		Mus musculus
TRATDRNNN
NNNYHATYA		 PBM
Berger et al.(2008)
Lhx1_2240 		0.851 0.877
Lhx5
M00445_2.00 		Mus musculus
TAATKRNNN
NNNYMATTA		 PBM
Berger et al.(2008)
Lhx5_2279 		0.851 0.877
LHX1
M05410_2.00 		Homo sapiens
NTRATBRN
NYVATYAN		 SELEX
Yin et al.(2017)
LHX1_eDBD_HT-SELEX 		0.851 0.877
LHX5
M04936_2.00 		Homo sapiens
NTAATTRS
SYAATTAN		 SELEX
Yin et al.(2017)
LHX5_FL_HT-SELEX 		0.851 0.877
LHX1
M05411_2.00 		Homo sapiens
NHRAYGHN
NDCRTYDN		 SELEX
Yin et al.(2017)
LHX1_eDBD_Methyl-HT-SELEX 		0.851 0.877
LHX5
M04937_2.00 		Homo sapiens
NTAAYGAN
NTCRTTAN		 SELEX
Yin et al.(2017)
LHX5_FL_Methyl-HT-SELEX_1 		0.851 0.877
LHX5
M04938_2.00 		Homo sapiens
NTAATTRV
BYAATTAN		 SELEX
Yin et al.(2017)
LHX5_FL_Methyl-HT-SELEX_2 		0.851 0.877
Lhx3
M00435_2.00 		Mus musculus
NNNYAATHW
WDATTRNNN		 PBM
Berger et al.(2008)
Lhx3_3431 		0.701 0.702
Lhx3
M02687_2.00 		Mus musculus
VRWTAATTAATTW
WAATTAATTAWYB		 SELEX
Mathelier et al.(2014)
MA0135.1 		0.701 0.702
LHX3
M09137_2.00 		Homo sapiens
NYTAATTAAWTHH
DDAWTTAATTARN		 Misc
Kulakovskiy et al.(2013)
LHX3_HUMAN.H11MO.0.C 		0.701 0.702
Lhx3
M09188_2.00 		Mus musculus
NYTRATKRV
BYMATYARN		 Misc
Kulakovskiy et al.(2013)
LHX3_MOUSE.H11MO.0.C 		0.701 0.702
Lhx3
M09570_2.00 		Mus musculus
NNBTAATTAV
BTAATTAVNN		 Misc
Heinz et al.(2010)
Neuron-Lhx3_GSE31456 		0.701 0.702
LHX3
M10657_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$LHX3A_01 		0.701 0.702
LHX3
M10658_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$LHX3b_01 		0.701 0.702
LHX3
M10659_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$LHX3_Q3 		0.701 0.702
Lhx4
M00430_2.00 		Mus musculus
NYAATHN
NDATTRN		 PBM
Berger et al.(2008)
Lhx4_1719 		0.701 0.684
Lhx4
M03257_2.00 		Mus musculus
BTAATTRN
NYAATTAV		 SELEX
Jolma et al.(2013)
Lhx4_1 		0.701 0.684
LHX4
M05063_2.00 		Homo sapiens
BYAATYRV
BYRATTRV		 SELEX
Yin et al.(2017)
LHX4_eDBD_HT-SELEX 		0.701 0.684
LHX4
M05066_2.00 		Homo sapiens
BTAATTAN
NTAATTAV		 SELEX
Yin et al.(2017)
LHX4_FL_HT-SELEX 		0.701 0.684
LHX4
M05064_2.00 		Homo sapiens
BYAATTRV
BYAATTRV		 SELEX
Yin et al.(2017)
LHX4_eDBD_Methyl-HT-SELEX_1 		0.701 0.684
LHX4
M05065_2.00 		Homo sapiens
NTWAYGHN
NDCRTWAN		 SELEX
Yin et al.(2017)
LHX4_eDBD_Methyl-HT-SELEX_2 		0.701 0.684
LHX4
M05067_2.00 		Homo sapiens
NYAATTRN
NYAATTRN		 SELEX
Yin et al.(2017)
LHX4_FL_Methyl-HT-SELEX_1 		0.701 0.684
LHX4
M05068_2.00 		Homo sapiens
NTAAYGHN
NDCRTTAN		 SELEX
Yin et al.(2017)
LHX4_FL_Methyl-HT-SELEX_2 		0.701 0.684
Lim3
M02116_2.00 		Drosophila melanogaster
NNNNNATBRN
NYVATNNNNN		 PBM
Weirauch et al.(2014)
pTH6478 		0.690 0.667
Lim3
M03796_2.00 		Drosophila melanogaster
BTAATTAV
BTAATTAV		 SELEX
Nitta et al.(2015)
Lim3_1 		0.690 0.667
Lim3
M06492_2.00 		Drosophila melanogaster
HTAATKA
TMATTAD		 B1H
Mathelier et al.(2014)
MA0195.1 		0.690 0.667
Lim3
M06258_2.00 		Drosophila melanogaster
HHTAATKA
TMATTADD		 B1H
Zhu et al.(2011)
Lim3_Cell_FBgn0002023 		0.690 0.667
Lim3
M06259_2.00 		Drosophila melanogaster
HTRATTR
YAATYAD		 B1H
Zhu et al.(2011)
Lim3_SOLEXA_FBgn0002023 		0.690 0.667
Dlx4
M00409_2.00 		Mus musculus
NWAATNDN
NHNATTWN		 PBM
Berger et al.(2008)
Dlx4_3488 		0.662 0.404
DLX4
M03112_2.00 		Homo sapiens
NTAATTRN
NYAATTAN		 SELEX
Jolma et al.(2013)
DLX4_1 		0.662 0.404
DLX4
M05002_2.00 		Homo sapiens
NTAATTRN
NYAATTAN		 SELEX
Yin et al.(2017)
DLX4_eDBD_HT-SELEX 		0.662 0.404
DLX4
M05005_2.00 		Homo sapiens
NTAATTRB
VYAATTAN		 SELEX
Yin et al.(2017)
DLX4_FL_HT-SELEX 		0.662 0.404
DLX4
M05003_2.00 		Homo sapiens
NTAAYRAB
VTYRTTAN		 SELEX
Yin et al.(2017)
DLX4_eDBD_Methyl-HT-SELEX_1 		0.662 0.404
DLX4
M05004_2.00 		Homo sapiens
NTAATTRN
NYAATTAN		 SELEX
Yin et al.(2017)
DLX4_eDBD_Methyl-HT-SELEX_2 		0.662 0.404
DLX4
M05006_2.00 		Homo sapiens
NTAAYKAB
VTMRTTAN		 SELEX
Yin et al.(2017)
DLX4_FL_Methyl-HT-SELEX_1 		0.662 0.404
DLX4
M05007_2.00 		Homo sapiens
NTAATTRB
VYAATTAN		 SELEX
Yin et al.(2017)
DLX4_FL_Methyl-HT-SELEX_2 		0.662 0.404
Dlx5
M00449_2.00 		Mus musculus
WRATNDN
NHNATYW		 PBM
Berger et al.(2008)
Dlx5_3419 		0.662 0.386
Dlx1
M00491_2.00 		Mus musculus
NTAATNDNN
NNHNATTAN		 PBM
Berger et al.(2008)
Dlx1_1741 		0.662 0.386
DLX1
M03166_2.00 		Homo sapiens
NNTAATTDNN
NNHAATTANN		 SELEX
Jolma et al.(2013)
DLX1_1 		0.662 0.386
DLX5
M03095_2.00 		Homo sapiens
NTAATTRN
NYAATTAN		 SELEX
Jolma et al.(2013)
DLX5_1 		0.662 0.386
DLX6
M03078_2.00 		Homo sapiens
NTAATTRN
NYAATTAN		 SELEX
Jolma et al.(2013)
DLX6_1 		0.662 0.386
Dlx1
M03281_2.00 		Mus musculus
NTAATTRN
NYAATTAN		 SELEX
Jolma et al.(2013)
Dlx1_1 		0.662 0.386
DLX1
M05176_2.00 		Homo sapiens
NTAATTRN
NYAATTAN		 SELEX
Yin et al.(2017)
DLX1_eDBD_HT-SELEX 		0.662 0.386
DLX1
M05178_2.00 		Homo sapiens
NTAATTRB
VYAATTAN		 SELEX
Yin et al.(2017)
DLX1_FL_HT-SELEX 		0.662 0.386
DLX5
M04953_2.00 		Homo sapiens
NTAATTRN
NYAATTAN		 SELEX
Yin et al.(2017)
DLX5_eDBD_HT-SELEX 		0.662 0.386
DLX5
M04956_2.00 		Homo sapiens
NTAATTRN
NYAATTAN		 SELEX
Yin et al.(2017)
DLX5_FL_HT-SELEX 		0.662 0.386
DLX6
M04905_2.00 		Homo sapiens
NTAATTRN
NYAATTAN		 SELEX
Yin et al.(2017)
DLX6_eDBD_HT-SELEX 		0.662 0.386
Dlx5
M09195_2.00 		Mus musculus
WAATTRYWKBB
VVMWRYAATTW		 Misc
Kulakovskiy et al.(2013)
DLX5_MOUSE.H11MO.0.C 		0.662 0.386
DLX5
M10650_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$DLX5_Q3 		0.662 0.386
DLX1
M05177_2.00 		Homo sapiens
NTAATTRB
VYAATTAN		 SELEX
Yin et al.(2017)
DLX1_eDBD_Methyl-HT-SELEX 		0.662 0.386
DLX1
M05179_2.00 		Homo sapiens
NTAATTRN
NYAATTAN		 SELEX
Yin et al.(2017)
DLX1_FL_Methyl-HT-SELEX 		0.662 0.386
DLX5
M04954_2.00 		Homo sapiens
NTAAYDAB
VTHRTTAN		 SELEX
Yin et al.(2017)
DLX5_eDBD_Methyl-HT-SELEX_1 		0.662 0.386
DLX5
M04955_2.00 		Homo sapiens
NTAATTRN
NYAATTAN		 SELEX
Yin et al.(2017)
DLX5_eDBD_Methyl-HT-SELEX_2 		0.662 0.386
DLX5
M04957_2.00 		Homo sapiens
NTAAYGHB
VDCRTTAN		 SELEX
Yin et al.(2017)
DLX5_FL_Methyl-HT-SELEX_1 		0.662 0.386
DLX5
M04958_2.00 		Homo sapiens
NTAATTRN
NYAATTAN		 SELEX
Yin et al.(2017)
DLX5_FL_Methyl-HT-SELEX_2 		0.662 0.386
DLX6
M04906_2.00 		Homo sapiens
NTAAYKAB
VTMRTTAN		 SELEX
Yin et al.(2017)
DLX6_eDBD_Methyl-HT-SELEX_1 		0.662 0.386
DLX6
M04907_2.00 		Homo sapiens
NTAATTRN
NYAATTAN		 SELEX
Yin et al.(2017)
DLX6_eDBD_Methyl-HT-SELEX_2 		0.662 0.386
Q0N4F9_NEMVE
M02162_2.00 		Nematostella vectensis
DTAATTAK
MTAATTAH		 PBM
Weirauch et al.(2014)
pTH6150 		0.652 0.421
Rax
M00426_2.00 		Mus musculus
NNTAATTRN
NYAATTANN		 PBM
Berger et al.(2008)
Rax_3443 		0.652 0.456
RAX
M03149_2.00 		Homo sapiens
NHTAATTRNN
NNYAATTADN		 SELEX
Jolma et al.(2013)
RAX_1 		0.652 0.456
RAX2
M03214_2.00 		Homo sapiens
NTAATTRN
NYAATTAN		 SELEX
Jolma et al.(2013)
RAXL1_1 		0.652 0.456
Rx
M03840_2.00 		Drosophila melanogaster
BTAATTRV
BYAATTAV		 SELEX
Nitta et al.(2015)
Rx_1 		0.652 0.456
Rx
M03841_2.00 		Drosophila melanogaster
NTAATBNSATTAN
NTAATSNVATTAN		 SELEX
Nitta et al.(2015)
Rx_2 		0.652 0.456
RAX
M05142_2.00 		Homo sapiens
YYAATTRN
NYAATTRR		 SELEX
Yin et al.(2017)
RAX_eDBD_HT-SELEX 		0.652 0.456
Rx
M06520_2.00 		Drosophila melanogaster
YTAATTR
YAATTAR		 B1H
Mathelier et al.(2014)
MA0202.1 		0.652 0.456
Rx
M06317_2.00 		Drosophila melanogaster
VYTAATTR
YAATTARB		 B1H
Zhu et al.(2011)
Rx_Cell_FBgn0020617 		0.652 0.456
Rx
M06318_2.00 		Drosophila melanogaster
HTAATTR
YAATTAD		 B1H
Zhu et al.(2011)
Rx_SOLEXA_FBgn0020617 		0.652 0.456
Rax
M10773_2.00 		Rattus norvegicus Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$RAX_04 		0.652 0.456
RAX
M05143_2.00 		Homo sapiens
NTAAYRNN
NNYRTTAN		 SELEX
Yin et al.(2017)
RAX_eDBD_Methyl-HT-SELEX_1 		0.652 0.456
RAX
M05144_2.00 		Homo sapiens
YYAATTRN
NYAATTRR		 SELEX
Yin et al.(2017)
RAX_eDBD_Methyl-HT-SELEX_2 		0.652 0.456
Prrx1
M00431_2.00 		Mus musculus
TAATTRNN
NNYAATTA		 PBM
Berger et al.(2008)
Prrx1_3442 		0.652 0.439
Prrx2
M00486_2.00 		Mus musculus
WRATNNN
NNNATYW		 PBM
Berger et al.(2008)
Prrx2_3072 		0.652 0.439
PRRX1
M03120_2.00 		Homo sapiens
NTAATTRN
NYAATTAN		 SELEX
Jolma et al.(2013)
PRRX1_1 		0.652 0.439
PRRX1
M03121_2.00 		Homo sapiens
NTAATTRN
NYAATTAN		 SELEX
Jolma et al.(2013)
PRRX1_2 		0.652 0.439
PRRX1
M03122_2.00 		Homo sapiens
TAATTVRRTTA
TAAYYBAATTA		 SELEX
Jolma et al.(2013)
PRRX1_3 		0.652 0.439
PRRX2
M03200_2.00 		Homo sapiens
NTAATTRN
NYAATTAN		 SELEX
Jolma et al.(2013)
PRRX2_1 		0.652 0.439
Prrx2
M03277_2.00 		Mus musculus
NTAATTRN
NYAATTAN		 SELEX
Jolma et al.(2013)
Prrx2_1 		0.652 0.439
CG9876
M03865_2.00 		Drosophila melanogaster
SVTVATBRSN
NSYVATBABS		 SELEX
Nitta et al.(2015)
CG9876_1 		0.652 0.439
CG9876
M03866_2.00 		Drosophila melanogaster
NTAATTRV
BYAATTAN		 SELEX
Nitta et al.(2015)
CG9876_2 		0.652 0.439
CG9876
M03867_2.00 		Drosophila melanogaster
TAATYTAATTA
TAATTARATTA		 SELEX
Nitta et al.(2015)
CG9876_3 		0.652 0.439
CG9876
M03868_2.00 		Drosophila melanogaster
TAATTRVNTAATTR
YAATTANBYAATTA		 SELEX
Nitta et al.(2015)
CG9876_4 		0.652 0.439
PRRX2
M05262_2.00 		Homo sapiens
NTAATTRV
BYAATTAN		 SELEX
Yin et al.(2017)
PRRX2_FL_HT-SELEX 		0.652 0.439
PRRX2
M05258_2.00 		Homo sapiens
NTNAYGHN
NDCRTNAN		 SELEX
Yin et al.(2017)
PRRX2_eDBD_HT-SELEX_1 		0.652 0.439
PRRX2
M05259_2.00 		Homo sapiens
NTAATTRV
BYAATTAN		 SELEX
Yin et al.(2017)
PRRX2_eDBD_HT-SELEX_2 		0.652 0.439
CG9876
M06537_2.00 		Drosophila melanogaster
BTAATTR
YAATTAV		 B1H
Mathelier et al.(2014)
MA0184.1 		0.652 0.439
CG9876
M06350_2.00 		Drosophila melanogaster
DBTAATTR
YAATTAVH		 B1H
Zhu et al.(2011)
CG9876_Cell_FBgn0034821 		0.652 0.439
CG9876
M06351_2.00 		Drosophila melanogaster
HTAATTR
YAATTAD		 B1H
Zhu et al.(2011)
CG9876_SOLEXA_FBgn0034821 		0.652 0.439
PRRX2
M09156_2.00 		Homo sapiens
HTAATTR
YAATTAD		 Misc
Kulakovskiy et al.(2013)
PRRX2_HUMAN.H11MO.0.C 		0.652 0.439
Prrx2
M09207_2.00 		Mus musculus
HTAATTR
YAATTAD		 Misc
Kulakovskiy et al.(2013)
PRRX2_MOUSE.H11MO.0.C 		0.652 0.439
Prrx1
M10770_2.00 		Rattus norvegicus Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$PMX1_01 		0.652 0.439
PRRX1
M10675_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$PMX1_Q6 		0.652 0.439
PRRX2
M10735_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$PRRX2_05 		0.652 0.439
PRRX2
M10776_2.00 		Sus scrofa Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$PRX2_Q2 		0.652 0.439
Prrx2
M10767_2.00 		Mus musculus
HNVHTAATTRRNHNDW
WHNDNYYAATTADBND		 Transfac
Matys et al.(2006)
V$S8_01 		0.652 0.439
PRRX2
M05260_2.00 		Homo sapiens
NTAAYGHN
NDCRTTAN		 SELEX
Yin et al.(2017)
PRRX2_eDBD_Methyl-HT-SELEX_1 		0.652 0.439
PRRX2
M05261_2.00 		Homo sapiens
NTAATYRN
NYRATTAN		 SELEX
Yin et al.(2017)
PRRX2_eDBD_Methyl-HT-SELEX_2 		0.652 0.439
PRRX2
M05263_2.00 		Homo sapiens
NTAATTRR
YYAATTAN		 SELEX
Yin et al.(2017)
PRRX2_FL_Methyl-HT-SELEX_1 		0.652 0.439
PRRX2
M05264_2.00 		Homo sapiens
HTAAYGHN
NDCRTTAD		 SELEX
Yin et al.(2017)
PRRX2_FL_Methyl-HT-SELEX_2 		0.652 0.439
Dlx2
M00423_2.00 		Mus musculus
NTAATNDNN
NNHNATTAN		 PBM
Berger et al.(2008)
Dlx2_2273 		0.652 0.368
Dll
M02112_2.00 		Drosophila melanogaster
NVTAATTANN
NNTAATTABN		 PBM
Weirauch et al.(2014)
pTH5506 		0.652 0.368
DLX2
M03118_2.00 		Homo sapiens
NTAATTRN
NYAATTAN		 SELEX
Jolma et al.(2013)
DLX2_1 		0.652 0.368
Dlx2
M03254_2.00 		Mus musculus
NTAATTRN
NYAATTAN		 SELEX
Jolma et al.(2013)
Dlx2_1 		0.652 0.368
Dll
M03777_2.00 		Drosophila melanogaster
NTAATTRN
NYAATTAN		 SELEX
Nitta et al.(2015)
Dll_1 		0.652 0.368
Dll
M03778_2.00 		Drosophila melanogaster
NTAATTRN
NYAATTAN		 SELEX
Nitta et al.(2015)
Dll_2 		0.652 0.368
DLX2
M05026_2.00 		Homo sapiens
NTAATTRN
NYAATTAN		 SELEX
Yin et al.(2017)
DLX2_eDBD_HT-SELEX 		0.652 0.368
DLX2
M05028_2.00 		Homo sapiens
NTAATTRN
NYAATTAN		 SELEX
Yin et al.(2017)
DLX2_FL_HT-SELEX 		0.652 0.368
Dll
M06479_2.00 		Drosophila melanogaster
TAATTDB
VHAATTA		 B1H
Mathelier et al.(2014)
MA0187.1 		0.652 0.368
Dll
M06217_2.00 		Drosophila melanogaster
TAATTDB
VHAATTA		 B1H
Zhu et al.(2011)
Dll_Cell_FBgn0000157 		0.652 0.368
Dll
M06218_2.00 		Drosophila melanogaster
TAATKR
YMATTA		 B1H
Zhu et al.(2011)
Dll_SOLEXA_FBgn0000157 		0.652 0.368
DLX2
M10674_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$DLX2_Q6 		0.652 0.368
DLX2
M05027_2.00 		Homo sapiens
NTAATTRN
NYAATTAN		 SELEX
Yin et al.(2017)
DLX2_eDBD_Methyl-HT-SELEX 		0.652 0.368
DLX2
M05029_2.00 		Homo sapiens
NTAATTRN
NYAATTAN		 SELEX
Yin et al.(2017)
DLX2_FL_Methyl-HT-SELEX 		0.652 0.368
Dlx3
M00387_2.00 		Mus musculus
NTAATDRNN
NNYHATTAN		 PBM
Berger et al.(2008)
Dlx3_1030 		0.652 0.351
DLX3
M03081_2.00 		Homo sapiens
NTAATTRN
NYAATTAN		 SELEX
Jolma et al.(2013)
DLX3_1 		0.652 0.351
DLX3
M04922_2.00 		Homo sapiens
NTAATTRN
NYAATTAN		 SELEX
Yin et al.(2017)
DLX3_eDBD_HT-SELEX 		0.652 0.351
DLX3
M04925_2.00 		Homo sapiens
NTAATTRB
VYAATTAN		 SELEX
Yin et al.(2017)
DLX3_FL_HT-SELEX 		0.652 0.351
DLX3
M09129_2.00 		Homo sapiens
RVTAATTRVH
DBYAATTABY		 Misc
Kulakovskiy et al.(2013)
DLX3_HUMAN.H11MO.0.C 		0.652 0.351
Dlx3
M09172_2.00 		Mus musculus
RVTAATTRVH
DBYAATTABY		 Misc
Kulakovskiy et al.(2013)
DLX3_MOUSE.H11MO.0.C 		0.652 0.351
dlx3.L
M10803_2.00 		Xenopus laevis Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$DLX3_02 		0.652 0.351
DLX3
M10638_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$DLX3_Q3 		0.652 0.351
DLX3
M10639_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$DLX3_Q6 		0.652 0.351
dlx3.L
M10804_2.00 		Xenopus laevis
YAWRTAAAYAWWRY
RYWWTRTTTAYWWR		 Transfac
Matys et al.(2006)
V$XFD1_01 		0.652 0.351
DLX3
M04923_2.00 		Homo sapiens
NTWAYKHB
VDMRTWAN		 SELEX
Yin et al.(2017)
DLX3_eDBD_Methyl-HT-SELEX_1 		0.652 0.351
DLX3
M04924_2.00 		Homo sapiens
NTAATTRN
NYAATTAN		 SELEX
Yin et al.(2017)
DLX3_eDBD_Methyl-HT-SELEX_2 		0.652 0.351
DLX3
M04926_2.00 		Homo sapiens
NTWAYGHB
VDCRTWAN		 SELEX
Yin et al.(2017)
DLX3_FL_Methyl-HT-SELEX_1 		0.652 0.351
DLX3
M04927_2.00 		Homo sapiens
NTAATTRN
NYAATTAN		 SELEX
Yin et al.(2017)
DLX3_FL_Methyl-HT-SELEX_2 		0.652 0.351
C4B866_NEMVE
M02052_2.00 		Nematostella vectensis
NNTTAATTARNN
NNYTAATTAANN		 PBM
Weirauch et al.(2014)
pTH6176 		0.650 0.561
MIXL1
M03231_2.00 		Homo sapiens
NNTAATTRNN
NNYAATTANN		 SELEX
Jolma et al.(2013)
MIXL1_1 		0.649 0.509
MIXL1
M05359_2.00 		Homo sapiens
TAATBNVATTA
TAATBNVATTA		 SELEX
Yin et al.(2017)
MIXL1_FL_HT-SELEX 		0.649 0.509
MIXL1
M10747_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$MIXL1_02 		0.649 0.509
MIXL1
M05360_2.00 		Homo sapiens
TAATYNRATTA
TAATYNRATTA		 SELEX
Yin et al.(2017)
MIXL1_FL_Methyl-HT-SELEX_1 		0.649 0.509
MIXL1
M05361_2.00 		Homo sapiens
TAATYDCRTTA
TAAYGHRATTA		 SELEX
Yin et al.(2017)
MIXL1_FL_Methyl-HT-SELEX_2 		0.649 0.509
Mixl1
M10765_2.00 		Mus musculus Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$MIXL1_03 		0.645 0.491
Sebox
M02097_2.00 		Mus musculus
NHTTAATTAN
NTAATTAADN		 PBM
Weirauch et al.(2014)
pTH6379 		0.641 0.456
PROP1
M00317_2.00 		Homo sapiens
HAAYNNNNNN
NNNNNNRTTD		 PBM
Barrera et al.(2016)
PROP1_REF 		0.639 0.509
Prop1
M00498_2.00 		Mus musculus
NRAKDDN
NHHMTYN		 PBM
Berger et al.(2008)
Prop1_3949 		0.639 0.509
PROP1
M03216_2.00 		Homo sapiens
TAATTHRATTA
TAATYDAATTA		 SELEX
Jolma et al.(2013)
PROP1_1 		0.639 0.509
PROP1
M03217_2.00 		Homo sapiens
TAATKNRRTTA
TAAYYNMATTA		 SELEX
Jolma et al.(2013)
PROP1_2 		0.639 0.509
PROP1
M05298_2.00 		Homo sapiens
WAATTNNRTTD
HAAYNNAATTW		 SELEX
Yin et al.(2017)
PROP1_eDBD_HT-SELEX 		0.639 0.509
PROP1
M05301_2.00 		Homo sapiens
TAATTNVATTA
TAATBNAATTA		 SELEX
Yin et al.(2017)
PROP1_FL_HT-SELEX 		0.639 0.509
Prop1
M09210_2.00 		Mus musculus
TAATKRRATTA
TAATYYMATTA		 Misc
Kulakovskiy et al.(2013)
PROP1_MOUSE.H11MO.0.C 		0.639 0.509
PROP1
M10777_2.00 		Sus scrofa Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$PROP1_01 		0.639 0.509
PROP1
M10737_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$PROP1_Q2 		0.639 0.509
PROP1
M00315_2.00 		Homo sapiens
NNHNATNN
NNATNDNN		 PBM
Barrera et al.(2016)
PROP1_R112Q 		0.639 0.509
PROP1
M05299_2.00 		Homo sapiens
TAATTNVRTTW
WAAYBNAATTA		 SELEX
Yin et al.(2017)
PROP1_eDBD_Methyl-HT-SELEX_1 		0.639 0.509
PROP1
M05300_2.00 		Homo sapiens
TAAYNDCRTTA
TAAYGHNRTTA		 SELEX
Yin et al.(2017)
PROP1_eDBD_Methyl-HT-SELEX_2 		0.639 0.509
PROP1
M05302_2.00 		Homo sapiens
TAATTNVRTTA
TAAYBNAATTA		 SELEX
Yin et al.(2017)
PROP1_FL_Methyl-HT-SELEX_1 		0.639 0.509
PROP1
M05303_2.00 		Homo sapiens
TAATYRVRTTA
TAAYBYRATTA		 SELEX
Yin et al.(2017)
PROP1_FL_Methyl-HT-SELEX_2 		0.639 0.509
ESX1
M00292_2.00 		Homo sapiens
NNTAATNDN
NHNATTANN		 PBM
Barrera et al.(2016)
ESX1_REF 		0.639 0.386
ESX1
M03137_2.00 		Homo sapiens
NNTAATTRNN
NNYAATTANN		 SELEX
Jolma et al.(2013)
ESX1_1 		0.639 0.386
ESX1
M03138_2.00 		Homo sapiens
NNTAATTRNN
NNYAATTANN		 SELEX
Jolma et al.(2013)
ESX1_2 		0.639 0.386
ESX1
M05087_2.00 		Homo sapiens
NTAATTRV
BYAATTAN		 SELEX
Yin et al.(2017)
ESX1_eDBD_HT-SELEX 		0.639 0.386
ESX1
M05089_2.00 		Homo sapiens
NTAATTRV
BYAATTAN		 SELEX
Yin et al.(2017)
ESX1_FL_HT-SELEX 		0.639 0.386
ESX1
M05088_2.00 		Homo sapiens
NTAATTRR
YYAATTAN		 SELEX
Yin et al.(2017)
ESX1_eDBD_Methyl-HT-SELEX 		0.639 0.386
ESX1
M05090_2.00 		Homo sapiens
NTAATTRR
YYAATTAN		 SELEX
Yin et al.(2017)
ESX1_FL_Methyl-HT-SELEX 		0.639 0.386
Alx3
M00402_2.00 		Mus musculus
WAATNDN
NHNATTW		 PBM
Berger et al.(2008)
Alx3_3418 		0.637 0.474
Alx1
M00471_2.00 		Mus musculus
NTAATTRN
NYAATTAN		 PBM
Berger et al.(2008)
Cart1_0997 		0.637 0.474
Alx1
M00472_2.00 		Mus musculus
NTAATDDN
NHHATTAN		 PBM
Berger et al.(2008)
Cart1_1275 		0.637 0.474
Alx4
M00487_2.00 		Mus musculus
NTAATDDN
NHHATTAN		 PBM
Berger et al.(2008)
Alx4_1744 		0.637 0.474
ALX3
M03172_2.00 		Homo sapiens
NNTAATTRNN
NNYAATTANN		 SELEX
Jolma et al.(2013)
ALX3_1 		0.637 0.474
ALX3
M03173_2.00 		Homo sapiens
NNTAATTRNN
NNYAATTANN		 SELEX
Jolma et al.(2013)
ALX3_2 		0.637 0.474
ALX3
M03174_2.00 		Homo sapiens
NTAATYNRATTAN
NTAATYNRATTAN		 SELEX
Jolma et al.(2013)
ALX3_3 		0.637 0.474
ALX4
M03079_2.00 		Homo sapiens
NTAATYNRRTTAN
NTAAYYNRATTAN		 SELEX
Jolma et al.(2013)
ALX4_1 		0.637 0.474
ALX1
M03226_2.00 		Homo sapiens
NTAATTRVRTTAN
NTAAYBYAATTAN		 SELEX
Jolma et al.(2013)
CART1_1 		0.637 0.474
Alx1
M03272_2.00 		Mus musculus
NNTAATTRRD
HYYAATTANN		 SELEX
Jolma et al.(2013)
Alx1_1 		0.637 0.474
Alx1
M03273_2.00 		Mus musculus
NTAATYNRATTAN
NTAATYNRATTAN		 SELEX
Jolma et al.(2013)
Alx1_2 		0.637 0.474
Alx4
M03278_2.00 		Mus musculus
NTAATYNRATTAN
NTAATYNRATTAN		 SELEX
Jolma et al.(2013)
Alx4_1 		0.637 0.474
ALX1
M05327_2.00 		Homo sapiens
TAATYTAATTA
TAATTARATTA		 SELEX
Yin et al.(2017)
ALX1_FL_HT-SELEX 		0.637 0.474
ALX3
M05195_2.00 		Homo sapiens
NTAATTRR
YYAATTAN		 SELEX
Yin et al.(2017)
ALX3_eDBD_HT-SELEX 		0.637 0.474
ALX3
M05198_2.00 		Homo sapiens
NTAATTRV
BYAATTAN		 SELEX
Yin et al.(2017)
ALX3_FL_HT-SELEX 		0.637 0.474
ALX4
M04917_2.00 		Homo sapiens
NTAATTRV
BYAATTAN		 SELEX
Yin et al.(2017)
ALX4_eDBD_HT-SELEX 		0.637 0.474
ALX1
M09160_2.00 		Homo sapiens
VTAATYRVATTA
TAATBYRATTAB		 Misc
Kulakovskiy et al.(2013)
ALX1_HUMAN.H11MO.0.B 		0.637 0.474
Alx1
M09201_2.00 		Mus musculus
VTAATYRVATTA
TAATBYRATTAB		 Misc
Kulakovskiy et al.(2013)
ALX1_MOUSE.H11MO.0.B 		0.637 0.474
ALX4
M10637_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$ALX4_01 		0.637 0.474
ALX1
M10741_2.00 		Homo sapiens
VVHTAATKNNHATTABYN
NRVTAATDNNMATTADBB		 Transfac
Matys et al.(2006)
V$CART1_01 		0.637 0.474
ALX1
M05328_2.00 		Homo sapiens
TAATYTAATTA
TAATTARATTA		 SELEX
Yin et al.(2017)
ALX1_FL_Methyl-HT-SELEX 		0.637 0.474
ALX3
M05196_2.00 		Homo sapiens
NTAATTRV
BYAATTAN		 SELEX
Yin et al.(2017)
ALX3_eDBD_Methyl-HT-SELEX_1 		0.637 0.474
ALX3
M05197_2.00 		Homo sapiens
NTAAYBHN
NDVRTTAN		 SELEX
Yin et al.(2017)
ALX3_eDBD_Methyl-HT-SELEX_2 		0.637 0.474
ALX3
M05199_2.00 		Homo sapiens
NTAATTRV
BYAATTAN		 SELEX
Yin et al.(2017)
ALX3_FL_Methyl-HT-SELEX_1 		0.637 0.474
ALX3
M05200_2.00 		Homo sapiens
NTAAYGHN
NDCRTTAN		 SELEX
Yin et al.(2017)
ALX3_FL_Methyl-HT-SELEX_2 		0.637 0.474
ALX4
M04918_2.00 		Homo sapiens
NTAATTRV
BYAATTAN		 SELEX
Yin et al.(2017)
ALX4_eDBD_Methyl-HT-SELEX_1 		0.637 0.474
ALX4
M04919_2.00 		Homo sapiens
NTWAYGHN
NDCRTWAN		 SELEX
Yin et al.(2017)
ALX4_eDBD_Methyl-HT-SELEX_2 		0.637 0.474
CG32532
M03874_2.00 		Drosophila melanogaster
NTAAYBNVRTTAN
NTAAYBNVRTTAN		 SELEX
Nitta et al.(2015)
CG32532_1 		0.636 0.456
CG32532
M06547_2.00 		Drosophila melanogaster
YTAATTR
YAATTAR		 B1H
Mathelier et al.(2014)
MA0179.1 		0.636 0.456
CG32532
M06370_2.00 		Drosophila melanogaster
YTAATTR
YAATTAR		 B1H
Zhu et al.(2011)
CG32532_Cell_FBgn0052532 		0.636 0.456
CG32532
M06371_2.00 		Drosophila melanogaster
HTAATTR
YAATTAD		 B1H
Zhu et al.(2011)
CG32532_SOLEXA_FBgn0052532 		0.636 0.456
al
M03776_2.00 		Drosophila melanogaster
TAAYBNVRTTA
TAAYBNVRTTA		 SELEX
Nitta et al.(2015)
al_1 		0.634 0.509
al
M06477_2.00 		Drosophila melanogaster
TAATTAA
TTAATTA		 B1H
Mathelier et al.(2014)
MA0208.1 		0.634 0.509
al
M06212_2.00 		Drosophila melanogaster
TAATTAA
TTAATTA		 B1H
Zhu et al.(2011)
Al_Cell_FBgn0000061 		0.634 0.509
al
M06213_2.00 		Drosophila melanogaster
NNYTAATTR
YAATTARNN		 B1H
Zhu et al.(2011)
Al_SOLEXA_FBgn0000061 		0.634 0.509
PROP1
M00316_2.00 		Homo sapiens
DTAATTRK
MYAATTAH		 PBM
Barrera et al.(2016)
PROP1_R99Q 		0.631 0.491
ARX
M00264_2.00 		Homo sapiens
NNWRATNNN
NNNATYWNN		 PBM
Barrera et al.(2016)
ARX_REF 		0.631 0.456
Arx
M00467_2.00 		Mus musculus
NTAATTDN
NHAATTAN		 PBM
Berger et al.(2008)
Arx_1738 		0.631 0.456
ARX
M03076_2.00 		Homo sapiens
NTAATYNRATTAN
NTAATYNRATTAN		 SELEX
Jolma et al.(2013)
ARX_1 		0.631 0.456
Arx
M03269_2.00 		Mus musculus
NTAATYNRATTAN
NTAATYNRATTAN		 SELEX
Jolma et al.(2013)
Arx_1 		0.631 0.456
CG2808
M03875_2.00 		Drosophila melanogaster
TAATYNSRTTA
TAAYSNRATTA		 SELEX
Nitta et al.(2015)
CG2808_1 		0.631 0.456
ARX
M04895_2.00 		Homo sapiens
BTAATTRR
YYAATTAV		 SELEX
Yin et al.(2017)
ARX_eDBD_HT-SELEX 		0.631 0.456
Arx
M10775_2.00 		Rattus norvegicus Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$ARX_05 		0.631 0.456
ARX
M04896_2.00 		Homo sapiens
NTAATTRV
BYAATTAN		 SELEX
Yin et al.(2017)
ARX_eDBD_Methyl-HT-SELEX 		0.631 0.456
DRGX
M03199_2.00 		Homo sapiens
NTAATTNRATTAN
NTAATYNAATTAN		 SELEX
Jolma et al.(2013)
DRGX_1 		0.631 0.439
DRGX
M05253_2.00 		Homo sapiens
NTAATTRR
YYAATTAN		 SELEX
Yin et al.(2017)
DRGX_eDBD_HT-SELEX 		0.631 0.439
Drgx
M10774_2.00 		Rattus norvegicus Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$PRRXL1_01 		0.631 0.439
ARX
M00260_2.00 		Homo sapiens
NMTAATTANNN
NNNTAATTAKN		 PBM
Barrera et al.(2016)
ARX_L343Q 		0.631 0.439
DRGX
M05254_2.00 		Homo sapiens
NTAATTRV
BYAATTAN		 SELEX
Yin et al.(2017)
DRGX_eDBD_Methyl-HT-SELEX 		0.631 0.439
ARX
M00261_2.00 		Homo sapiens
NNWRAYNNN
NNNRTYWNN		 PBM
Barrera et al.(2016)
ARX_P353L 		0.631 0.439
ARX
M00262_2.00 		Homo sapiens
ATAATTAT
ATAATTAT		 PBM
Barrera et al.(2016)
ARX_P353R 		0.631 0.439
hbn
M03813_2.00 		Drosophila melanogaster
HTAATYTAATTAD
HTAATTARATTAD		 SELEX
Nitta et al.(2015)
hbn_1 		0.630 0.439
Pph13
M03845_2.00 		Drosophila melanogaster
NTAATTRN
NYAATTAN		 SELEX
Nitta et al.(2015)
Pph13_1 		0.630 0.439
hbn
M06506_2.00 		Drosophila melanogaster
TTAATTR
YAATTAA		 B1H
Mathelier et al.(2014)
MA0226.1 		0.630 0.439
Pph13
M06522_2.00 		Drosophila melanogaster
NTAATTR
YAATTAN		 B1H
Mathelier et al.(2014)
MA0200.1 		0.630 0.439
hbn
M06291_2.00 		Drosophila melanogaster
TWAWTTR
YAAWTWA		 B1H
Zhu et al.(2011)
Hbn_Cell_FBgn0008636 		0.630 0.439
hbn
M06292_2.00 		Drosophila melanogaster
NHTAATTR
YAATTADN		 B1H
Zhu et al.(2011)
Hbn_SOLEXA_FBgn0008636 		0.630 0.439
Pph13
M06321_2.00 		Drosophila melanogaster
NHTAATTR
YAATTADN		 B1H
Zhu et al.(2011)
Pph13_Cell_FBgn0023489 		0.630 0.439
Pph13
M06322_2.00 		Drosophila melanogaster
YTAATTR
YAATTAR		 B1H
Zhu et al.(2011)
Pph13_SOLEXA_FBgn0023489 		0.630 0.439
PHOX2B
M00282_2.00 		Homo sapiens
TAATTRRY
RYYAATTA		 PBM
Barrera et al.(2016)
PHOX2B_REF 		0.630 0.421
Phox2a
M00400_2.00 		Mus musculus
NNHAAYNN
NNRTTDNN		 PBM
Berger et al.(2008)
Phox2a_3947 		0.630 0.421
Phox2b
M00401_2.00 		Mus musculus
NNHAAYNN
NNRTTDNN		 PBM
Berger et al.(2008)
Phox2b_3948 		0.630 0.421
PHOX2A
M03194_2.00 		Homo sapiens
TAATTRVRTTA
TAAYBYAATTA		 SELEX
Jolma et al.(2013)
PHOX2A_1 		0.630 0.421
PHOX2B
M03113_2.00 		Homo sapiens
TAATTRVRTTA
TAAYBYAATTA		 SELEX
Jolma et al.(2013)
PHOX2B_1 		0.630 0.421
PHOX2B
M03114_2.00 		Homo sapiens
TAATTRVRTTA
TAAYBYAATTA		 SELEX
Jolma et al.(2013)
PHOX2B_2 		0.630 0.421
PHOX2A
M05244_2.00 		Homo sapiens
NTAATTRV
BYAATTAN		 SELEX
Yin et al.(2017)
PHOX2A_eDBD_HT-SELEX 		0.630 0.421
PHOX2B
M05008_2.00 		Homo sapiens
BTAATYRV
BYRATTAV		 SELEX
Yin et al.(2017)
PHOX2B_eDBD_HT-SELEX 		0.630 0.421
PHOX2B
M05010_2.00 		Homo sapiens
TAATTWRATTA
TAATYWAATTA		 SELEX
Yin et al.(2017)
PHOX2B_FL_HT-SELEX 		0.630 0.421
Phox2a
M09564_2.00 		Mus musculus
NTAATBNRATTA
TAATYNVATTAN		 Misc
Heinz et al.(2010)
Neuron-Phox2a_GSE31456 		0.630 0.421
PHOX2B
M00279_2.00 		Homo sapiens
NVTAATTRMNN
NNKYAATTABN		 PBM
Barrera et al.(2016)
PHOX2B_R100L 		0.630 0.421
PHOX2B
M00280_2.00 		Homo sapiens
NNNHATAAWTDNN
NNHAWTTATDNNN		 PBM
Barrera et al.(2016)
PHOX2B_R141G 		0.630 0.421
PHOX2B
M00281_2.00 		Homo sapiens
NNNNNNNNRY
RYNNNNNNNN		 PBM
Barrera et al.(2016)
PHOX2B_R141Q 		0.630 0.421
PHOX2A
M05245_2.00 		Homo sapiens
NTAATTRV
BYAATTAN		 SELEX
Yin et al.(2017)
PHOX2A_eDBD_Methyl-HT-SELEX 		0.630 0.421
PHOX2B
M05009_2.00 		Homo sapiens
BTAATYRN
NYRATTAV		 SELEX
Yin et al.(2017)
PHOX2B_eDBD_Methyl-HT-SELEX 		0.630 0.421
PHOX2B
M05011_2.00 		Homo sapiens
TAATTHRATTA
TAATYDAATTA		 SELEX
Yin et al.(2017)
PHOX2B_FL_Methyl-HT-SELEX 		0.630 0.421
VSX1
M00269_2.00 		Homo sapiens
NNWAAYNNN
NNNRTTWNN		 PBM
Barrera et al.(2016)
VSX1_REF 		0.629 0.509
VSX1
M00266_2.00 		Homo sapiens
NNTAAYNNN
NNNRTTANN		 PBM
Barrera et al.(2016)
VSX1_G160D 		0.629 0.509
VSX1
M00268_2.00 		Homo sapiens
NNWRAYNNN
NNNRTYWNN		 PBM
Barrera et al.(2016)
VSX1_R166Q 		0.629 0.509
Vsx1
M00459_2.00 		Mus musculus
NNTAATDDN
NHHATTANN		 PBM
Berger et al.(2008)
Vsx1_1728 		0.628 0.491
Vsx1
M03267_2.00 		Mus musculus
NTAATTRN
NYAATTAN		 SELEX
Jolma et al.(2013)
Vsx1_1 		0.628 0.491
Q9BJW6_9CNID
M02215_2.00 		Sarsia sp. Long Island Sound
NBTAATTAVN
NBTAATTAVN		 PBM
Weirauch et al.(2014)
pTH6287 		0.628 0.404
CG11294
M03855_2.00 		Drosophila melanogaster
TAATTVVATTA
TAATBBAATTA		 SELEX
Nitta et al.(2015)
CG11294_1 		0.625 0.404
CG11294
M03856_2.00 		Drosophila melanogaster
TAATTDVATTA
TAATBHAATTA		 SELEX
Nitta et al.(2015)
CG11294_2 		0.625 0.404
PHDP
M03849_2.00 		Drosophila melanogaster
NTAATKNVATTAN
NTAATBNMATTAN		 SELEX
Nitta et al.(2015)
PHDP_1 		0.625 0.404
PHDP
M06525_2.00 		Drosophila melanogaster
HTAATTD
HAATTAD		 B1H
Mathelier et al.(2014)
MA0457.1 		0.625 0.404
CG11294
M06531_2.00 		Drosophila melanogaster
TAATTAA
TTAATTA		 B1H
Mathelier et al.(2014)
MA0172.1 		0.625 0.404
CG11294
M06337_2.00 		Drosophila melanogaster
TAATTAA
TTAATTA		 B1H
Zhu et al.(2011)
CG11294_Cell_FBgn0030058 		0.625 0.404
CG11294
M06338_2.00 		Drosophila melanogaster
HTAATTR
YAATTAD		 B1H
Zhu et al.(2011)
CG11294_SOLEXA_FBgn0030058 		0.625 0.404
PHDP
M06325_2.00 		Drosophila melanogaster
HTAATT
AATTAD		 B1H
Zhu et al.(2011)
PhdP_Cell_FBgn0025334 		0.625 0.404
PHDP
M06326_2.00 		Drosophila melanogaster
YTAATT
AATTAR		 B1H
Zhu et al.(2011)
PhdP_SOLEXA_FBgn0025334 		0.625 0.404
VSX2
M00287_2.00 		Homo sapiens
NYTAATTARN
NYTAATTARN		 PBM
Barrera et al.(2016)
VSX2_REF 		0.624 0.474
VSX2
M03124_2.00 		Homo sapiens
YTAATTAN
NTAATTAR		 SELEX
Jolma et al.(2013)
VSX2_1 		0.624 0.474
VSX2
M05036_2.00 		Homo sapiens
CTAATTAN
NTAATTAG		 SELEX
Yin et al.(2017)
VSX2_eDBD_HT-SELEX 		0.624 0.474
VSX2
M05039_2.00 		Homo sapiens
GCYAATYWY
RWRATTRGC		 SELEX
Yin et al.(2017)
VSX2_FL_HT-SELEX 		0.624 0.474
Vsx2
M09180_2.00 		Mus musculus
NNRGCTAATTAR
YTAATTAGCYNN		 Misc
Kulakovskiy et al.(2013)
VSX2_MOUSE.H11MO.0.C 		0.624 0.474
VSX2
M10676_2.00 		Homo sapiens
HNNGCTAATTANBN
NVNTAATTAGCNND		 Transfac
Matys et al.(2006)
V$CHX10_01 		0.624 0.474
VSX2
M05037_2.00 		Homo sapiens
VYAATTRR
YYAATTRB		 SELEX
Yin et al.(2017)
VSX2_eDBD_Methyl-HT-SELEX_1 		0.624 0.474
VSX2
M05038_2.00 		Homo sapiens
NTAAYKHN
NDMRTTAN		 SELEX
Yin et al.(2017)
VSX2_eDBD_Methyl-HT-SELEX_2 		0.624 0.474
VSX2
M05040_2.00 		Homo sapiens
NTAAYKVN
NBMRTTAN		 SELEX
Yin et al.(2017)
VSX2_FL_Methyl-HT-SELEX_1 		0.624 0.474
VSX2
M05041_2.00 		Homo sapiens
GCYAATYWY
RWRATTRGC		 SELEX
Yin et al.(2017)
VSX2_FL_Methyl-HT-SELEX_2 		0.624 0.474
VSX2
M00285_2.00 		Homo sapiens
NDTWTATTHNNN
NNNDAATAWAHN		 PBM
Barrera et al.(2016)
VSX2_R200P 		0.624 0.456
VSX2
M00286_2.00 		Homo sapiens
YRWKWNN
NNWMWYR		 PBM
Barrera et al.(2016)
VSX2_R200Q 		0.624 0.456
Vsx2
M02130_2.00 		Drosophila melanogaster
TTAATTAB
VTAATTAA		 PBM
Weirauch et al.(2014)
pTH6195 		0.623 0.456
Vsx2
M03880_2.00 		Drosophila melanogaster
NTAATTRN
NYAATTAN		 SELEX
Nitta et al.(2015)
Vsx2_1 		0.623 0.456
Vsx2
M03881_2.00 		Drosophila melanogaster
HRAYNVNNTRATKD
HMATYANNBNRTYD		 SELEX
Nitta et al.(2015)
Vsx2_2 		0.623 0.456
Vsx2
M06553_2.00 		Drosophila melanogaster
KTTAATTAG
CTAATTAAM		 B1H
Mathelier et al.(2014)
MA0180.1 		0.623 0.456
Vsx2
M06382_2.00 		Drosophila melanogaster
KTTAATTAG
CTAATTAAM		 B1H
Zhu et al.(2011)
CG33980_Cell_FBgn0053980 		0.623 0.456
Vsx2
M06383_2.00 		Drosophila melanogaster
NNTAATTRRN
NYYAATTANN		 B1H
Zhu et al.(2011)
CG33980_SOLEXA_2_0_FBgn0053980 		0.623 0.456
Vsx2
M06384_2.00 		Drosophila melanogaster
NNTAATKDN
NHMATTANN		 B1H
Zhu et al.(2011)
CG33980_SOLEXA_2_10_FBgn0053980 		0.623 0.456
Vsx2
M06385_2.00 		Drosophila melanogaster
NHTAATTR
YAATTADN		 B1H
Zhu et al.(2011)
CG33980_SOLEXA_FBgn0053980 		0.623 0.456
ceh-23
M00671_2.00 		Caenorhabditis elegans
HTAATTRNNN
NNNYAATTAD		 PBM
Narasimhan et al.(2015)
pTH9478 		0.620 0.368
mixl1.S
M02233_2.00 		Xenopus laevis
NHTAATTAANN
NNTTAATTADN		 PBM
Weirauch et al.(2014)
pTH6163 		0.618 0.456
Uncx
M00443_2.00 		Mus musculus
NTAATNDN
NHNATTAN		 PBM
Berger et al.(2008)
Uncx4 		0.618 0.421
uncx
M02111_2.00 		Tetraodon nigroviridis
NNTAATTRN
NYAATTANN		 PBM
Weirauch et al.(2014)
pTH5474 		0.618 0.421
UNCX
M03191_2.00 		Homo sapiens
NWAATTVVRTHWN
NWDAYBBAATTWN		 SELEX
Jolma et al.(2013)
UNCX_1 		0.618 0.421
UNCX
M03192_2.00 		Homo sapiens
NTAATTRN
NYAATTAN		 SELEX
Jolma et al.(2013)
UNCX_2 		0.618 0.421
Uncx
M03264_2.00 		Mus musculus
NTAATTVRATTAN
NTAATYBAATTAN		 SELEX
Jolma et al.(2013)
Uncx_1 		0.618 0.421
Uncx
M03265_2.00 		Mus musculus
NTAATTRR
YYAATTAN		 SELEX
Jolma et al.(2013)
Uncx_2 		0.618 0.421
UNCX
M05240_2.00 		Homo sapiens
NYAATTRV
BYAATTRN		 SELEX
Yin et al.(2017)
UNCX_eDBD_HT-SELEX 		0.618 0.421
UNCX
M05241_2.00 		Homo sapiens
NYRRYKNN
NNMRYYRN		 SELEX
Yin et al.(2017)
UNCX_eDBD_Methyl-HT-SELEX 		0.618 0.421
SHOX
M02095_2.00 		Homo sapiens
NTAATTRN
NYAATTAN		 PBM
Weirauch et al.(2014)
pTH5805 		0.617 0.404
Shox2
M00439_2.00 		Mus musculus
NTAATDDN
NHHATTAN		 PBM
Berger et al.(2008)
Shox2_2641 		0.617 0.404
SHOX
M03232_2.00 		Homo sapiens
NTAATTRN
NYAATTAN		 SELEX
Jolma et al.(2013)
SHOX_1 		0.617 0.404
SHOX2
M03204_2.00 		Homo sapiens
BTAATTRN
NYAATTAV		 SELEX
Jolma et al.(2013)
SHOX2_1 		0.617 0.404
Shox2
M03263_2.00 		Mus musculus
NTAATTRN
NYAATTAN		 SELEX
Jolma et al.(2013)
Shox2_1 		0.617 0.404
CG5369
M03876_2.00 		Drosophila melanogaster
TAATTHVATTA
TAATBDAATTA		 SELEX
Nitta et al.(2015)
CG5369_1 		0.617 0.404
CG5369
M03877_2.00 		Drosophila melanogaster
TAATTRNNTAATBN
NVATTANNYAATTA		 SELEX
Nitta et al.(2015)
CG5369_2 		0.617 0.404
CG5369
M03878_2.00 		Drosophila melanogaster
TAATTVRATWA
TWATYBAATTA		 SELEX
Nitta et al.(2015)
CG5369_3 		0.617 0.404
SHOX
M05366_2.00 		Homo sapiens
NTAATTRV
BYAATTAN		 SELEX
Yin et al.(2017)
SHOX_eDBD_HT-SELEX 		0.617 0.404
Shox2
M10772_2.00 		Rattus norvegicus Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SHOX2_05 		0.617 0.404
SHOX
M05367_2.00 		Homo sapiens
NTAATTRV
BYAATTAN		 SELEX
Yin et al.(2017)
SHOX_eDBD_Methyl-HT-SELEX_1 		0.617 0.404
SHOX
M05368_2.00 		Homo sapiens
NTAAYGAN
NTCRTTAN		 SELEX
Yin et al.(2017)
SHOX_eDBD_Methyl-HT-SELEX_2 		0.617 0.404
VSX1
M00267_2.00 		Homo sapiens
NNHAAYNNN
NNNRTTDNN		 PBM
Barrera et al.(2016)
VSX1_Q175H 		0.617 0.491
eve
M00556_2.00 		Drosophila melanogaster
NNTAATTARN
NYTAATTANN		 PBM
Busser et al.(2012a)
Eve 		0.615 0.386
eve
M02115_2.00 		Drosophila melanogaster
NTAATNDNN
NNHNATTAN		 PBM
Weirauch et al.(2014)
pTH6436 		0.615 0.386
eve
M03794_2.00 		Drosophila melanogaster
VYTAATKASN
NSTMATTARB		 SELEX
Nitta et al.(2015)
eve_1 		0.615 0.386
eve
M06486_2.00 		Drosophila melanogaster
YTAATKA
TMATTAR		 B1H
Mathelier et al.(2014)
MA0221.1 		0.615 0.386
eve
M06240_2.00 		Drosophila melanogaster
DYTAATKA
TMATTARH		 B1H
Zhu et al.(2011)
Eve_Cell_FBgn0000606 		0.615 0.386
eve
M06241_2.00 		Drosophila melanogaster
HKBTAAYNDTKY
RMAHNRTTAVMD		 B1H
Zhu et al.(2011)
eve_FlyReg_FBgn0000606 		0.615 0.386
eve
M06242_2.00 		Drosophila melanogaster
NYTAATKA
TMATTARN		 B1H
Zhu et al.(2011)
Eve_SOLEXA_FBgn0000606 		0.615 0.386
eve
M09678_2.00 		Drosophila melanogaster
NKHTAATKD
HMATTADMN		 Misc
Kulakovskiy et al.(2009)
eve 		0.615 0.386
eve
M10786_2.00 		Drosophila melanogaster Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
I$EVE_Q6 		0.615 0.386
vsx2
M02079_2.00 		Danio rerio
NNYTAATTARN
NYTAATTARNN		 PBM
Weirauch et al.(2014)
pTH6221 		0.612 0.456
ISX
M00319_2.00 		Homo sapiens
DTAATTRK
MYAATTAH		 PBM
Barrera et al.(2016)
ISX_REF 		0.612 0.456
ISX
M03218_2.00 		Homo sapiens
NTAATTARATTAN
NTAATYTAATTAN		 SELEX
Jolma et al.(2013)
ISX_1 		0.612 0.456
ISX
M03219_2.00 		Homo sapiens
NTAATTRV
BYAATTAN		 SELEX
Jolma et al.(2013)
ISX_2 		0.612 0.456
ISX
M03220_2.00 		Homo sapiens
NTAATTRN
NYAATTAN		 SELEX
Jolma et al.(2013)
ISX_3 		0.612 0.456
ISX
M05304_2.00 		Homo sapiens
BTAATTRG
CYAATTAV		 SELEX
Yin et al.(2017)
ISX_eDBD_HT-SELEX 		0.612 0.456
ISX
M05307_2.00 		Homo sapiens
YTAATTRS
SYAATTAR		 SELEX
Yin et al.(2017)
ISX_FL_HT-SELEX 		0.612 0.456
ISX
M05305_2.00 		Homo sapiens
NTAATTAG
CTAATTAN		 SELEX
Yin et al.(2017)
ISX_eDBD_Methyl-HT-SELEX_1 		0.612 0.456
ISX
M05306_2.00 		Homo sapiens
HTAAYGHN
NDCRTTAD		 SELEX
Yin et al.(2017)
ISX_eDBD_Methyl-HT-SELEX_2 		0.612 0.456
ISX
M05308_2.00 		Homo sapiens
YTAATTRS
SYAATTAR		 SELEX
Yin et al.(2017)
ISX_FL_Methyl-HT-SELEX_1 		0.612 0.456
ISX
M05309_2.00 		Homo sapiens
HTAAYGHN
NDCRTTAD		 SELEX
Yin et al.(2017)
ISX_FL_Methyl-HT-SELEX_2 		0.612 0.456
Isx
M00452_2.00 		Mus musculus
NNHDATNN
NNATHDNN		 PBM
Berger et al.(2008)
Isx_3445 		0.612 0.439
Meox1
M00384_2.00 		Mus musculus
NTRATKRNN
NNYMATYAN		 PBM
Berger et al.(2008)
Meox1_2310 		0.610 0.368
MEOX1
M03077_2.00 		Homo sapiens
NNTAATTASN
NSTAATTANN		 SELEX
Jolma et al.(2013)
MEOX1_1 		0.610 0.368
btn
M03832_2.00 		Drosophila melanogaster
NNTAATKANB
VNTMATTANN		 SELEX
Nitta et al.(2015)
btn_1 		0.610 0.368
btn
M03833_2.00 		Drosophila melanogaster
VNTAATKABN
NVTMATTANB		 SELEX
Nitta et al.(2015)
btn_2 		0.610 0.368
MEOX1
M04901_2.00 		Homo sapiens
NTDAYGHB
VDCRTHAN		 SELEX
Yin et al.(2017)
MEOX1_FL_HT-SELEX_1 		0.610 0.368
MEOX1
M04902_2.00 		Homo sapiens
NTMATKRN
NYMATKAN		 SELEX
Yin et al.(2017)
MEOX1_FL_HT-SELEX_2 		0.610 0.368
btn
M06515_2.00 		Drosophila melanogaster
DTAATKA
TMATTAH		 B1H
Mathelier et al.(2014)
MA0215.1 		0.610 0.368
btn
M06307_2.00 		Drosophila melanogaster
NDTAATKA
TMATTAHN		 B1H
Zhu et al.(2011)
Btn_Cell_FBgn0014949 		0.610 0.368
btn
M06308_2.00 		Drosophila melanogaster
HTAATKA
TMATTAD		 B1H
Zhu et al.(2011)
Btn_SOLEXA_FBgn0014949 		0.610 0.368
MEOX1
M04903_2.00 		Homo sapiens
NTAAYGWB
VWCRTTAN		 SELEX
Yin et al.(2017)
MEOX1_FL_Methyl-HT-SELEX_1 		0.610 0.368
MEOX1
M04904_2.00 		Homo sapiens
NTAATKRN
NYMATTAN		 SELEX
Yin et al.(2017)
MEOX1_FL_Methyl-HT-SELEX_2 		0.610 0.368
HOXA2
M02083_2.00 		Homo sapiens
NNNDHHNNN
NNNDDHNNN		 PBM
Weirauch et al.(2014)
pTH5887 		0.610 0.351
Hoxa2
M00403_2.00 		Mus musculus
NTAATKRNN
NNYMATTAN		 PBM
Berger et al.(2008)
Hoxa2_3079 		0.610 0.351
HOXA2
M03097_2.00 		Homo sapiens
NBTAATKRNN
NNYMATTAVN		 SELEX
Jolma et al.(2013)
HOXA2_1 		0.610 0.351
HOXB2
M03213_2.00 		Homo sapiens
NNTAATKRNN
NNYMATTANN		 SELEX
Jolma et al.(2013)
HOXB2_1 		0.610 0.351
Hoxa2
M03251_2.00 		Mus musculus
NNTAATKRNN
NNYMATTANN		 SELEX
Jolma et al.(2013)
Hoxa2_1 		0.610 0.351
pb
M03872_2.00 		Drosophila melanogaster
NTRAYKRY
RYMRTYAN		 SELEX
Nitta et al.(2015)
pb_1 		0.610 0.351
HOXA2
M04962_2.00 		Homo sapiens
NTAATKRV
BYMATTAN		 SELEX
Yin et al.(2017)
HOXA2_eDBD_HT-SELEX 		0.610 0.351
HOXA2
M04965_2.00 		Homo sapiens
NTAATKAB
VTMATTAN		 SELEX
Yin et al.(2017)
HOXA2_FL_HT-SELEX 		0.610 0.351
HOXB2
M05292_2.00 		Homo sapiens
BTAATKRV
BYMATTAV		 SELEX
Yin et al.(2017)
HOXB2_eDBD_HT-SELEX 		0.610 0.351
pb
M06545_2.00 		Drosophila melanogaster
YTAATKA
TMATTAR		 B1H
Mathelier et al.(2014)
MA0238.1 		0.610 0.351
pb
M06366_2.00 		Drosophila melanogaster
BYTAATKA
TMATTARV		 B1H
Zhu et al.(2011)
Pb_Cell_FBgn0051481 		0.610 0.351
pb
M06367_2.00 		Drosophila melanogaster
YTAATKA
TMATTAR		 B1H
Zhu et al.(2011)
Pb_SOLEXA_FBgn0051481 		0.610 0.351
Hoxa2
M09566_2.00 		Mus musculus
DTGATKGATKDB
VHMATCMATCAH		 Misc
Heinz et al.(2010)
mES-Hoxa2_Donaldson_et_al. 		0.610 0.351
HOXA2
M04963_2.00 		Homo sapiens
NTAATTAN
NTAATTAN		 SELEX
Yin et al.(2017)
HOXA2_eDBD_Methyl-HT-SELEX_1 		0.610 0.351
HOXA2
M04964_2.00 		Homo sapiens
HTAAYGAB
VTCRTTAD		 SELEX
Yin et al.(2017)
HOXA2_eDBD_Methyl-HT-SELEX_2 		0.610 0.351
HOXA2
M04966_2.00 		Homo sapiens
NTAATKAB
VTMATTAN		 SELEX
Yin et al.(2017)
HOXA2_FL_Methyl-HT-SELEX_1 		0.610 0.351
HOXA2
M04967_2.00 		Homo sapiens
HTAAYGAB
VTCRTTAD		 SELEX
Yin et al.(2017)
HOXA2_FL_Methyl-HT-SELEX_2 		0.610 0.351
HOXB2
M05293_2.00 		Homo sapiens
NTAATKRN
NYMATTAN		 SELEX
Yin et al.(2017)
HOXB2_eDBD_Methyl-HT-SELEX_1 		0.610 0.351
HOXB2
M05294_2.00 		Homo sapiens
HTAAYGAB
VTCRTTAD		 SELEX
Yin et al.(2017)
HOXB2_eDBD_Methyl-HT-SELEX_2 		0.610 0.351
Vsx1
M02129_2.00 		Drosophila melanogaster
VTTAATTRR
YYAATTAAB		 PBM
Weirauch et al.(2014)
pTH5821 		0.610 0.439
Vsx1
M03879_2.00 		Drosophila melanogaster
NTAATTRV
BYAATTAN		 SELEX
Nitta et al.(2015)
Vsx1_1 		0.610 0.439
Vsx1
M06552_2.00 		Drosophila melanogaster
YTAATTR
YAATTAR		 B1H
Mathelier et al.(2014)
MA0181.1 		0.610 0.439
Vsx1
M06380_2.00 		Drosophila melanogaster
YTAATTR
YAATTAR		 B1H
Zhu et al.(2011)
CG4136_Cell_FBgn0029775 		0.610 0.439
Vsx1
M06381_2.00 		Drosophila melanogaster
HTAATTR
YAATTAD		 B1H
Zhu et al.(2011)
CG4136_SOLEXA_FBgn0029775 		0.610 0.439
repo
M03826_2.00 		Drosophila melanogaster
VTTAATTARB
VYTAATTAAB		 SELEX
Nitta et al.(2015)
repo_1 		0.608 0.456
repo
M03827_2.00 		Drosophila melanogaster
VKYAATTRRN
NYYAATTRMB		 SELEX
Nitta et al.(2015)
repo_2 		0.608 0.456
repo
M03828_2.00 		Drosophila melanogaster
VBYAATTRVNNBYAATTRVB
VBYAATTRVNNBYAATTRVB		 SELEX
Nitta et al.(2015)
repo_3 		0.608 0.456
repo
M06511_2.00 		Drosophila melanogaster
TTAATTA
TAATTAA		 B1H
Mathelier et al.(2014)
MA0240.1 		0.608 0.456
repo
M06301_2.00 		Drosophila melanogaster
DTTAATTA
TAATTAAH		 B1H
Zhu et al.(2011)
Repo_Cell_FBgn0011701 		0.608 0.456
repo
M06302_2.00 		Drosophila melanogaster
YTAATTR
YAATTAR		 B1H
Zhu et al.(2011)
Repo_SOLEXA_FBgn0011701 		0.608 0.456
LHX2
M02085_2.00 		Homo sapiens
NNNYAAHDDN
NHHDTTRNNN		 PBM
Weirauch et al.(2014)
pTH5812 		0.607 0.474
Lhx2
M00380_2.00 		Mus musculus
NTAATKRN
NYMATTAN		 PBM
Berger et al.(2008)
Lhx2_0953 		0.607 0.474
Lhx9
M00406_2.00 		Mus musculus
NTAATDRN
NYHATTAN		 PBM
Berger et al.(2008)
Lhx9_3492 		0.607 0.474
LHX2
M03106_2.00 		Homo sapiens
NNTAATTAGN
NCTAATTANN		 SELEX
Jolma et al.(2013)
LHX2_1 		0.607 0.474
LHX2
M03107_2.00 		Homo sapiens
YAATTANVCTAATTR
YAATTAGBNTAATTR		 SELEX
Jolma et al.(2013)
LHX2_2 		0.607 0.474
LHX9
M03163_2.00 		Homo sapiens
NTAATTRN
NYAATTAN		 SELEX
Jolma et al.(2013)
LHX9_1 		0.607 0.474
LHX9
M03164_2.00 		Homo sapiens
TAATTRGYMATTA
TAATKRCYAATTA		 SELEX
Jolma et al.(2013)
LHX9_2 		0.607 0.474
LHX9
M05170_2.00 		Homo sapiens
YTAATTRG
CYAATTAR		 SELEX
Yin et al.(2017)
LHX9_eDBD_HT-SELEX 		0.607 0.474
LHX9
M05173_2.00 		Homo sapiens
NTAATTRG
CYAATTAN		 SELEX
Yin et al.(2017)
LHX9_FL_HT-SELEX 		0.607 0.474
LHX2
M09136_2.00 		Homo sapiens
NBYTAATTRVNB
VNBYAATTARVN		 Misc
Kulakovskiy et al.(2013)
LHX2_HUMAN.H11MO.0.A 		0.607 0.474
Lhx2
M09169_2.00 		Mus musculus
NNTAATKRGN
NCYMATTANN		 Misc
Kulakovskiy et al.(2013)
LHX2_MOUSE.H11MO.0.A 		0.607 0.474
Lhx2
M09562_2.00 		Mus musculus
NYTAATTA
TAATTARN		 Misc
Heinz et al.(2010)
HFSC-Lhx2_GSE48068 		0.607 0.474
LHX2
M10655_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$LHX2_Q4 		0.607 0.474
LHX2
M10656_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$LHX2_Q6 		0.607 0.474
LHX9
M05171_2.00 		Homo sapiens
YTAATTRS
SYAATTAR		 SELEX
Yin et al.(2017)
LHX9_eDBD_Methyl-HT-SELEX_1 		0.607 0.474
LHX9
M05172_2.00 		Homo sapiens
HTAACGAB
VTCGTTAD		 SELEX
Yin et al.(2017)
LHX9_eDBD_Methyl-HT-SELEX_2 		0.607 0.474
LHX9
M05174_2.00 		Homo sapiens
NTAATTRV
BYAATTAN		 SELEX
Yin et al.(2017)
LHX9_FL_Methyl-HT-SELEX_1 		0.607 0.474
LHX9
M05175_2.00 		Homo sapiens
HTAACGAB
VTCGTTAD		 SELEX
Yin et al.(2017)
LHX9_FL_Methyl-HT-SELEX_2 		0.607 0.474
zfhx4
M02108_2.00 		Tetraodon nigroviridis
NNTAATTRN
NYAATTANN		 PBM
Weirauch et al.(2014)
pTH5654 		0.606 0.474
KLLA0_D10043g
M02140_2.00 		Kluyveromyces lactis
NNNNWWNNNN
NNNNWWNNNN		 PBM
Weirauch et al.(2014)
pTH6070 		0.606 0.404
ap
M06478_2.00 		Drosophila melanogaster
YTAATKA
TMATTAR		 B1H
Mathelier et al.(2014)
MA0209.1 		0.606 0.474
ap
M06214_2.00 		Drosophila melanogaster
VYTAATKA
TMATTARB		 B1H
Zhu et al.(2011)
Ap_Cell_FBgn0000099 		0.606 0.474
ap
M06215_2.00 		Drosophila melanogaster
BAATHA
TDATTV		 B1H
Zhu et al.(2011)
ap_FlyReg_FBgn0000099 		0.606 0.474
ap
M06216_2.00 		Drosophila melanogaster
HTAATKR
YMATTAD		 B1H
Zhu et al.(2011)
Ap_SOLEXA_FBgn0000099 		0.606 0.474
ap
M10781_2.00 		Drosophila melanogaster Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
I$AP_Q6 		0.606 0.474
Mnx1
M00388_2.00 		Mus musculus
NTAATBDNNN
NNNHVATTAN		 PBM
Berger et al.(2008)
Hlxb9_3422 		0.601 0.333
MNX1
M03143_2.00 		Homo sapiens
NHTAATTRNH
DNYAATTADN		 SELEX
Jolma et al.(2013)
MNX1_1 		0.601 0.333
exex
M03871_2.00 		Drosophila melanogaster
NNNNYAATTNNYDN
NHRNNAATTRNNNN		 SELEX
Nitta et al.(2015)
exex_1 		0.601 0.333
MNX1
M05126_2.00 		Homo sapiens
NTAATTRN
NYAATTAN		 SELEX
Yin et al.(2017)
MNX1_eDBD_HT-SELEX 		0.601 0.333
exex
M06544_2.00 		Drosophila melanogaster
BTAATTA
TAATTAV		 B1H
Mathelier et al.(2014)
MA0224.1 		0.601 0.333
exex
M06364_2.00 		Drosophila melanogaster
TAATTAV
BTAATTA		 B1H
Zhu et al.(2011)
Exex_Cell_FBgn0041156 		0.601 0.333
exex
M06365_2.00 		Drosophila melanogaster
TAATBR
YVATTA		 B1H
Zhu et al.(2011)
Exex_SOLEXA_FBgn0041156 		0.601 0.333
MNX1
M05127_2.00 		Homo sapiens
HTAAYGHB
VDCRTTAD		 SELEX
Yin et al.(2017)
MNX1_eDBD_Methyl-HT-SELEX_1 		0.601 0.333
MNX1
M05128_2.00 		Homo sapiens
NTAATTRN
NYAATTAN		 SELEX
Yin et al.(2017)
MNX1_eDBD_Methyl-HT-SELEX_2 		0.601 0.333
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
GB55663-PA Homeodomain 271 327

Links

Other Homeodomain family TFs
Other Apis mellifera TFs

3696 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
nAv.1.0.1.g03365 Acanthocheilonema viteae nAv.1.0.1.g03365 N 0.000
BTMF_0001802901 Brugia timori BTMF_0001802901 N 0.000
nLs.2.1.2.g06304 Litomosoides sigmodontis nLs.2.1.2.g06304 N 0.000
LOAG_03126 Loa loa LOAG_03126 N 0.000
OFLC_0001600901 Onchocerca flexuosa OFLC_0001600901 N 0.000
nOo.2.0.1.g02859 Onchocerca ochengi nOo.2.0.1.g02859 N 0.000
WBGene00240585 Onchocerca volvulus WBGene00240585 N 0.000
TCLT_0000641701 Thelazia callipaeda TCLT_0000641701 N 0.000