GLYMA09G06730 (Glycine max)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00046 (Homeobox) IPR001356 GLYMA09G06730 T218812_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
MTR_2g038000
M02141_2.00 		Medicago truncatula
NDNYWNNNNN
NNNNNWRNHN		 PBM
Weirauch et al.(2014)
pTH6339 		0.703 0.750
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
GLYMA09G06730.2 Homeodomain 490 545

Links

Other Homeodomain family TFs
Other Glycine max TFs

29 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
PRHA Arabidopsis lyrata scaffold_701235.1 I 0.650
PRH Arabidopsis thaliana AT4G29940 I 0.649
Bostr.7867s0841 Boechera stricta Bostr.7867s0841 I 0.694
Bo1g014710 Brassica oleracea Bo1g014710 I 0.661
Bo3g175850 Brassica oleracea Bo3g175850 I 0.683
Bra010310 Brassica rapa Bra010310 I 0.683
Bra011153 Brassica rapa Bra011153 I 0.661
Cagra.0268s0009 Capsella grandiflora Cagra.0268s0009 I 0.683
Carubv10004175m.g Capsella rubella Carubv10004175m.g I 0.683
Ca_08838 Cicer arietinum Ca_08838 I 0.703
Cla019142 Citrullus lanatus Cla019142 N 0.602
Cucsa.081360 Cucumis sativus Cucsa.081360 N 0.602
Eucgr.C00114 Eucalyptus grandis Eucgr.C00114 I 0.683
Thhalv10024489m.g Eutrema salsugineum Thhalv10024489m.g I 0.694
gene17249-v1.0-hybrid Fragaria vesca gene17249-v1.0-hybrid I 0.820
GLYMA13G00540 Glycine max GLYMA13G00540 I 0.772
GLYMA15G17956 Glycine max GLYMA15G17956 I 0.831
GLYMA17G06690 Glycine max GLYMA17G06690 I 0.772
Gorai.009G002500 Gossypium raimondii Gorai.009G002500 I 0.707
chr4.CM0244.10.nd Lotus japonicus chr4.CM0244.10.nd I 0.663
cassava27173.m1 Manihot esculenta cassava27173.m1 I 0.748
MTR_2g038000 Medicago truncatula MTR_2g038000 D 0.703
mgf003961m Mimulus guttatus mgf003961m I 0.696
POPTR_0006s07520 Populus trichocarpa POPTR_0006s07520 N 0.736
POPTR_0018s13920 Populus trichocarpa POPTR_0018s13920 N 0.737
Pm008905 Prunus mume Pm008905 I 0.831
PRUPE_ppa023964mg Prunus persica PRUPE_ppa023964mg I 0.831
29671.m000294 Ricinus communis 29671.m000294 I 0.716
SapurV1A.0140s0170 Salix purpurea SapurV1A.0140s0170 N 0.682