GLYMA15G17956 (Glycine max)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00046 (Homeobox) IPR001356 GLYMA15G17956 T218882_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
MTR_2g038000
M02141_2.00 		Medicago truncatula
NDNYWNNNNN
NNNNNWRNHN		 PBM
Weirauch et al.(2014)
pTH6339 		0.670 0.778
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
GLYMA15G17956.1 Homeodomain 565 618
GLYMA15G17956.2 Homeodomain 547 600
GLYMA15G17956.3 Homeodomain 491 545

Links

Other Homeodomain family TFs
Other Glycine max TFs

30 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
PRHA Arabidopsis lyrata scaffold_701235.1 I 0.619
PRH Arabidopsis thaliana AT4G29940 I 0.617
Bostr.7867s0841 Boechera stricta Bostr.7867s0841 I 0.662
Bo1g014710 Brassica oleracea Bo1g014710 I 0.661
Bo3g175850 Brassica oleracea Bo3g175850 I 0.652
Bra010310 Brassica rapa Bra010310 I 0.652
Bra011153 Brassica rapa Bra011153 I 0.661
Cagra.0268s0009 Capsella grandiflora Cagra.0268s0009 I 0.652
Carubv10004175m.g Capsella rubella Carubv10004175m.g I 0.652
Ca_08838 Cicer arietinum Ca_08838 I 0.703
Cla019142 Citrullus lanatus Cla019142 N 0.666
Cucsa.081360 Cucumis sativus Cucsa.081360 N 0.666
Eucgr.C00114 Eucalyptus grandis Eucgr.C00114 I 0.652
Thhalv10024489m.g Eutrema salsugineum Thhalv10024489m.g I 0.662
gene17249-v1.0-hybrid Fragaria vesca gene17249-v1.0-hybrid I 0.788
GLYMA17G06690 Glycine max GLYMA17G06690 I 0.772
GLYMA13G00540 Glycine max GLYMA13G00540 I 0.772
GLYMA09G06730 Glycine max GLYMA09G06730 I 0.831
Gorai.009G002500 Gossypium raimondii Gorai.009G002500 I 0.675
chr4.CM0244.10.nd Lotus japonicus chr4.CM0244.10.nd I 0.631
cassava27173.m1 Manihot esculenta cassava27173.m1 I 0.716
MTR_2g038000 Medicago truncatula MTR_2g038000 D 0.703
mgf003961m Mimulus guttatus mgf003961m I 0.665
POPTR_0018s13920 Populus trichocarpa POPTR_0018s13920 N 0.706
POPTR_0006s07520 Populus trichocarpa POPTR_0006s07520 N 0.705
Pm008905 Prunus mume Pm008905 I 0.800
PRUPE_ppa023964mg Prunus persica PRUPE_ppa023964mg I 0.800
29671.m000294 Ricinus communis 29671.m000294 I 0.716
SapurV1A.0140s0170 Salix purpurea SapurV1A.0140s0170 N 0.651