GRMZM2G166041 (Zea mays)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00046 (Homeobox) IPR001356 GRMZM2G166041 T219035_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ATHB-4
M01065_2.00 		Arabidopsis thaliana
NBMTGCATRNN
NNYATGCAKVN		 PBM
Sullivan et al.(2014)
pTH8184 		0.796 0.614
ATHB-4
M02042_2.00 		Arabidopsis thaliana
NNWTNATTRN
NYAATNAWNN		 PBM
Weirauch et al.(2014)
pTH8667 		0.796 0.614
HAT3
M00728_2.00 		Arabidopsis thaliana
DTGATTRV
BYAATCAH		 PBM
Chang et al.(2013)
pTH7400 		0.775 0.596
HAT1
M02047_2.00 		Arabidopsis thaliana
NMATGATTRN
NYAATCATKN		 PBM
Weirauch et al.(2014)
pTH8107 		0.746 0.632
HAT1
M06922_2.00 		Arabidopsis thaliana
NHAATGATTRNNWDW
WHWNNYAATCATTDN		 Dap-seq
OMalley et al.(2016)
HAT1_col_a 		0.746 0.632
HAT1
M06923_2.00 		Arabidopsis thaliana
NYAATCATTDN
NHAATGATTRN		 Dap-seq
OMalley et al.(2016)
HAT1_colamp_a 		0.746 0.632
HAT2
M06929_2.00 		Arabidopsis thaliana
NHAATGATTRN
NYAATCATTDN		 Dap-seq
OMalley et al.(2016)
HAT2_colamp_a 		0.744 0.596
HAT2
M06930_2.00 		Arabidopsis thaliana
WNYAATCATWD
HWATGATTRNW		 Dap-seq
OMalley et al.(2016)
HAT2_col_v31 		0.744 0.596
HAT22
M06926_2.00 		Arabidopsis thaliana
NNYAATCATT
AATGATTRNN		 Dap-seq
OMalley et al.(2016)
HAT22_col_a 		0.730 0.667
ATHB-X
M06902_2.00 		Arabidopsis thaliana
HHAATRATTRN
NYAATYATTDD		 Dap-seq
OMalley et al.(2016)
ATHB18_col_a 		0.702 0.596
ATHB-X
M06903_2.00 		Arabidopsis thaliana
NYAATGATTRV
BYAATCATTRN		 Dap-seq
OMalley et al.(2016)
ATHB18_colamp_a 		0.702 0.596
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
GRMZM2G166041_P01 Homeodomain 134 190

Links

Other Homeodomain family TFs
Other Zea mays TFs

693 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
nAv.1.0.1.g02318 Acanthocheilonema viteae nAv.1.0.1.g02318 N 0.000
ASIM_0001701001 Anisakis simplex ASIM_0001701001 I 0.000
ALUE_0000964501 Ascaris lumbricoides ALUE_0000964501 I 0.000
ASU_08322 Ascaris suum ASU_08322 I 0.000
Bm4873 Brugia malayi Bm4873 N 0.000
BTMF_0001588101 Brugia timori BTMF_0001588101 N 0.000
CBN07010 Caenorhabditis brenneri CBN07010 I 0.000
CBN25998 Caenorhabditis brenneri CBN25998 I 0.000
pax-1 Caenorhabditis elegans WBGene00003937 I 0.000
CJA06788 Caenorhabditis japonica CJA06788 I 0.000
nDi.2.2.2.g06454 Dirofilaria immitis nDi.2.2.2.g06454 N 0.000
EEL_0000498601 Elaeophora elaphi EEL_0000498601 N 0.000
LOAG_17445 Loa loa LOAG_17445 N 0.000
WBGene00242657 Onchocerca volvulus WBGene00242657 N 0.000
WUBG_12339 Wuchereria bancrofti WUBG_12339 N 0.000