CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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MTR_4g088375
(
Medicago truncatula
)
Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00046 (Homeobox)
IPR001356
MTR_4g088375
T220817_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
RLT1
M02038_2.00
Arabidopsis thaliana
NDHTCWWN
NWWGADHN
PBM
Weirauch et al.(2014)
pTH5432
0.855
0.807
For this family, TFs with SR scores >
0.599
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
KEH30986
Homeodomain
32
88
KPKRQMKTPFQLETLEKAYALDNYPSEPVRIDLSEKLGLTDRQLQMWFCHRRLKDKK
KEH30988
Homeodomain
32
88
KPKRQMKTPFQLETLEKAYALDNYPSEPVRIDLSEKLGLTDRQLQMWFCHRRLKDKK
KEH30989
Homeodomain
32
88
KPKRQMKTPFQLETLEKAYALDNYPSEPVRIDLSEKLGLTDRQLQMWFCHRRLKDKK
Links
Other
Homeodomain
family TFs
Other
Medicago truncatula
TFs
112 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ACRE_016450
Acremonium chrysogenum
ACRE_016450
N
0.000
M437DRAFT_55194
Aureobasidium melanogenum
M437DRAFT_55194
N
0.000
M438DRAFT_353130
Aureobasidium pullulans
M438DRAFT_353130
N
0.000
AUEXF2481DRAFT_2325
Aureobasidium subglaciale
AUEXF2481DRAFT_2325
N
0.000
BAUCODRAFT_101507
Baudoinia compniacensis
BAUCODRAFT_101507
N
0.000
BBA_07446
Beauveria bassiana
BBA_07446
N
0.000
COCC4DRAFT_21834
Bipolaris maydis
COCC4DRAFT_21834
N
0.000
COCMIDRAFT_8551
Bipolaris oryzae
COCMIDRAFT_8551
N
0.000
COCSADRAFT_80011
Bipolaris sorokiniana
COCSADRAFT_80011
N
0.000
COCVIDRAFT_96750
Bipolaris victoriae
COCVIDRAFT_96750
N
0.000
COCCADRAFT_6869
Bipolaris zeicola
COCCADRAFT_6869
N
0.000
BGHDH14_bgh02194
Blumeria graminis
BGHDH14_bgh02194
N
0.000
estExt_Genewise1.C_110361
Cochliobolus heterostrophus C5
estExt_Genewise1.C_110361
N
0.000
CFIO01_10250
Colletotrichum fioriniae
CFIO01_10250
N
0.000
CGGC5_3246
Colletotrichum gloeosporioides
CGGC5_3246
N
0.000
GLRG_05436
Colletotrichum graminicola
GLRG_05436
N
0.000
CH063_06226
Colletotrichum higginsianum
CH063_06226
N
0.000
Cob_01104
Colletotrichum orbiculare
Cob_01104
N
0.000
CSUB01_00584
Colletotrichum sublineola
CSUB01_00584
N
0.000
W97_07908
Coniosporium apollinis
W97_07908
N
0.000
CCM_05113
Cordyceps militaris
CCM_05113
N
0.000
DOTSEDRAFT_165097
Dothistroma septosporum
DOTSEDRAFT_165097
N
0.000
EV44_g0882
Erysiphe necator
EV44_g0882
N
0.000
FGRRES_09495
Fusarium graminearum
FGRRES_09495
N
0.000
FPSE_10753
Fusarium pseudograminearum
FPSE_10753
N
0.000
NechaG32416
Fusarium solani
NechaG32416
N
0.000
MPH_11315
Macrophomina phaseolina
MPH_11315
N
0.000
MAC_02687
Metarhizium acridum
MAC_02687
N
0.000
MAM_02840
Metarhizium album
MAM_02840
N
0.000
MANI_018633
Metarhizium anisopliae
MANI_018633
N
0.000
MBR_02416
Metarhizium brunneum
MBR_02416
N
0.000
MGU_00595
Metarhizium guizhouense
MGU_00595
N
0.000
MAJ_00221
Metarhizium majus
MAJ_00221
N
0.000
X797_000454
Metarhizium robertsii
X797_000454
N
0.000
e_gw1.1.55.1
Mycosphaerella fijiensis
e_gw1.1.55.1
N
0.000
estExt_Genewise1Plus.C_chr_41111
Mycosphaerella graminicola
estExt_Genewise1Plus.C_chr_41111
N
0.000
e_gw1.18.1597.1
Nectria haematococca
e_gw1.18.1597.1
N
0.000
SNOG_14338
Phaeosphaeria nodorum
SNOG_14338
N
0.000
MYCFIDRAFT_28820
Pseudocercospora fijiensis
MYCFIDRAFT_28820
N
0.000
GMDG_01999
Pseudogymnoascus destructans
GMDG_01999
N
0.000
V499_03352
Pseudogymnoascus pannorum
V499_03352
N
0.000
SAPIO_CDS8133
Scedosporium apiospermum
SAPIO_CDS8133
N
0.000
SETTUDRAFT_85025
Setosphaeria turcica
SETTUDRAFT_85025
N
0.000
S40288_07815
Stachybotrys chartarum
S40288_07815
N
0.000
S40285_04138
Stachybotrys chlorohalonata
S40285_04138
N
0.000
SNOG_14338
Stagonospora nodorum
SNOG_14338
N
0.000
TRIATDRAFT_212147
Trichoderma atroviride
TRIATDRAFT_212147
N
0.000
TRIREDRAFT_57100
Trichoderma reesei
TRIREDRAFT_57100
N
0.000
TRIVIDRAFT_194623
Trichoderma virens
TRIVIDRAFT_194623
N
0.000
UV8b_863
Ustilaginoidea virens
UV8b_863
N
0.000
PV09_04501
Verruconis gallopava
PV09_04501
N
0.000
Mycgr3G71341
Zymoseptoria tritici
Mycgr3G71341
N
0.000