PFICI_09516 (Pestalotiopsis fici)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00046 (Homeobox) IPR001356 PFICI_09516 T222128_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
NCU09556
M02226_2.00 		Neurospora crassa
TTAATWTA
TAWATTAA		 PBM
Weirauch et al.(2014)
pTH8955 		0.867 1.000
Q0UJ27_PHANO_CONSTRUCT
M02202_2.00 		PBM CONSTRUCTS
NYAATHWNN
NNWDATTRN		 PBM
Weirauch et al.(2014)
pTH6773 		0.776 0.877
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ETS79663 Homeodomain 223 280

Links

Other Homeodomain family TFs
Other Pestalotiopsis fici TFs

106 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
F775_07408 Aegilops tauschii F775_07408 N 0.000
BRADI1G34320 Brachypodium distachyon BRADI1G34320 N 0.000
BRADI4G34050 Brachypodium distachyon BRADI4G34050 N 0.000
Ciclev10008843m.g Citrus clementina Ciclev10008843m.g N 0.000
MLOC_66533 Hordeum vulgare MLOC_66533 N 0.000
LPERR09G11190 Leersia perrieri LPERR09G11190 N 0.000
GSMUA_Achr3G05490_001 Musa acuminata GSMUA_Achr3G05490_001 N 0.000
GSMUA_Achr9G14080_001 Musa acuminata GSMUA_Achr9G14080_001 N 0.000
OBART09G15030 Oryza barthii OBART09G15030 N 0.000
OB09G21610 Oryza brachyantha OB09G21610 N 0.000
ORGLA09G0115900 Oryza glaberrima ORGLA09G0115900 N 0.000
OGLUM09G15680 Oryza glumaepatula OGLUM09G15680 N 0.000
BGIOSGA029516 Oryza indica BGIOSGA029516 N 0.000
OMERI07G04230 Oryza meridionalis OMERI07G04230 N 0.000
ONIVA09G15650 Oryza nivara ONIVA09G15650 N 0.000
OPUNC09G13490 Oryza punctata OPUNC09G13490 N 0.000
ORUFI09G16230 Oryza rufipogon ORUFI09G16230 N 0.000
OS09G0494300 Oryza sativa OS09G0494300 N 0.000
Pavir.Ba01676 Panicum virgatum Pavir.Ba01676 N 0.000
Pavir.J30425 Panicum virgatum Pavir.J30425 N 0.000
Si030613m.g Setaria italica Si030613m.g N 0.000
Solyc05g047450.1 Solanum lycopersicum Solyc05g047450.1 N 0.000
PGSC0003DMG400013699 Solanum tuberosum PGSC0003DMG400013699 N 0.000
Sb02g028780 Sorghum bicolor Sb02g028780 N 0.000
Traes_5BL_445FD57BE Triticum aestivum Traes_5BL_445FD57BE N 0.000
Traes_5DL_F17F78F73 Triticum aestivum Traes_5DL_F17F78F73 N 0.000
TRIUR3_24492 Triticum urartu TRIUR3_24492 N 0.000
GRMZM2G168269 Zea mays GRMZM2G168269 N 0.000
GRMZM2G025095 Zea mays GRMZM2G025095 N 0.000