SOCG_04229 (Schizosaccharomyces octosporus)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00046 (Homeobox) IPR001356 SOCG_04229 T223531_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
phx1
M02173_2.00 		Schizosaccharomyces pombe
NWTTAATTANN
NNTAATTAAWN		 PBM
Weirauch et al.(2014)
pTH6047 		0.754 0.719
kal-1
M02225_2.00 		Neurospora crassa
NNNNRHNN
NNDYNNNN		 PBM
Weirauch et al.(2014)
pTH8911 		0.615 0.544
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
EPX70728 Homeodomain 162 218

Links

Other Homeodomain family TFs
Other Schizosaccharomyces octosporus TFs

54 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ATMYBL2 Arabidopsis lyrata fgenesh2_kg.2__1365__AT1G71030.1 N
ATMYBL2 Arabidopsis thaliana AT1G71030 N
Bostr.10273s0244 Boechera stricta Bostr.10273s0244 N
Bo2g070770 Brassica oleracea Bo2g070770 N
Bo6g112670 Brassica oleracea Bo6g112670 N
Bra007957 Brassica rapa Bra007957 N
Cagra.0147s0041 Capsella grandiflora Cagra.0147s0041 N
Carubv10020983m.g Capsella rubella Carubv10020983m.g N
Thhalv10019036m.g Eutrema salsugineum Thhalv10019036m.g N
mgf018170m Mimulus guttatus mgf018170m N
OBART01G01770 Oryza barthii OBART01G01770 N
OBART01G27550 Oryza barthii OBART01G27550 N
OGLUM01G01950 Oryza glumaepatula OGLUM01G01950 N
BGIOSGA002691 Oryza indica BGIOSGA002691 N
OMERI01G01270 Oryza meridionalis OMERI01G01270 N
ONIVA01G01950 Oryza nivara ONIVA01G01950 N
OPUNC01G01540 Oryza punctata OPUNC01G01540 N
OS01G0127450 Oryza sativa OS01G0127450 N