CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Ca_00337
(
Cicer arietinum
)
Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00046 (Homeobox)
IPR001356
Ca_00337
T225389_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
RLT1
M02038_2.00
Arabidopsis thaliana
NDHTCWWN
NWWGADHN
PBM
Weirauch et al.(2014)
pTH5432
0.855
0.877
For this family, TFs with SR scores >
0.599
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Ca_00337
Homeodomain
47
103
KPKRQMKTPFQLETLEKAYALENYPSEVTRVELSEKLGLSDRQLQMWFCHRRLKDKK
Links
Other
Homeodomain
family TFs
Other
Cicer arietinum
TFs
111 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
fgenesh1_pg.00083_#_396
Aspergillus carbonarius
fgenesh1_pg.00083_#_396
N
ACLA_021680
Aspergillus clavatus
CADACLAG00003021
N
AFUA_1G13750
Aspergillus fumigatus
CADAFUAG00007079
N
CADANGAG00007007
Aspergillus niger
CADANGAG00007007
N
ATEG_00582
Aspergillus terreus
CADATEAG00007537
N
BDDG_02980
Blastomyces dermatitidis
BDDG_02980
N
PVAR5_5233
Byssochlamys spectabilis
PVAR5_5233
N
PV04_08090
Capronia semiimmersa
PV04_08090
N
Z519_01293
Cladophialophora bantiana
Z519_01293
N
G647_02466
Cladophialophora carrionii
G647_02466
N
PV07_11807
Cladophialophora immunda
PV07_11807
N
A1O5_02185
Cladophialophora psammophila
A1O5_02185
N
A1O7_07617
Cladophialophora yegresii
A1O7_07617
N
CIMG_03383
Coccidioides immitis
CIMG_03383
N
CPC735_008270
Coccidioides posadasii
CPC735_008270
N
HMPREF1541_03127
Cyphellophora europaea
HMPREF1541_03127
N
A1O9_02587
Exophiala aquamarina
A1O9_02587
N
PV10_02629
Exophiala mesophila
PV10_02629
N
PV06_02231
Exophiala oligosperma
PV06_02231
N
PV11_07301
Exophiala sideris
PV11_07301
N
PV08_11535
Exophiala spinifera
PV08_11535
N
PV05_09041
Exophiala xenobiotica
PV05_09041
N
Z517_03216
Fonsecaea pedrosoi
Z517_03216
N
HCBG_03883
Histoplasma capsulatum
HCBG_03883
N
NFIA_011750
Neosartorya fischeri
CADNFIAG00000778
N
OIDMADRAFT_81970
Oidiodendron maius
OIDMADRAFT_81970
N
PABG_02440
Paracoccidioides brasiliensis
PABG_02440
N
PAAG_12332
Paracoccidioides sp lutzii
PAAG_12332
N
PMAA_067070
Penicillium marneffei
PMAA_067070
N
PDE_00230
Penicillium oxalicum
PDE_00230
N
Z518_06914
Rhinocladiella mackenziei
Z518_06914
N
PMAA_067070
Talaromyces marneffei
PMAA_067070
N
TSTA_087090
Talaromyces stipitatus
TSTA_087090
N