cassava16038.m1 (Manihot esculenta)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00046 (Homeobox) IPR001356 cassava16038.m1 T227040_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ATH1
M10627_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ATH1_01 		0.846 0.902
Q5EVH4_OIKDI
M02227_2.00 		Oikopleura dioica
NTGACAKN
NMTGTCAN		 PBM
Weirauch et al.(2014)
pTH6041 		0.604 0.510
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
cassava16038.m1 Homeodomain 484 537

Links

Other Homeodomain family TFs
Other Manihot esculenta TFs

952 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
F443_00627 Phytophthora parasitica F443_00627 N 0.000
Physo138283 Phytophthora sojae Physo138283 N 0.000
maker-pag1_scaffold_64-snap-gene-0.36 Pythium aphanidermatum maker-pag1_scaffold_64-snap-gene-0.36 N 0.000
maker-par_contig_10149-snap-gene-0.0 Pythium arrhenomanes maker-par_contig_10149-snap-gene-0.0 N 0.000
maker-par_contig_572-fgenesh-gene-0.5 Pythium arrhenomanes maker-par_contig_572-fgenesh-gene-0.5 N 0.000
maker-pir_contig_493-snap-gene-0.11 Pythium irregulare maker-pir_contig_493-snap-gene-0.11 N 0.000
PYU1_G002992 Pythium ultimum PYU1_G002992 N 0.000
maker-pve_contig_397-fgenesh-gene-0.0 Pythium vexans maker-pve_contig_397-fgenesh-gene-0.0 N 0.000