CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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fgenesh1_pm.sca_76_chr13_2_0000002
(
Nectria haematococca
)
Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00046 (Homeobox)
IPR001356
fgenesh1_pm.sca_76_chr13_2_0000002
T227491_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
fgenesh1_pm.sca_76_chr13_2_0000002
Homeodomain
157
213
GTRFSRESVEILKNWLSSHSHHPYPDEKEKEMLQGQTGLNKTQIANWLANARRRGKT
Links
Other
Homeodomain
family TFs
Other
Nectria haematococca
TFs
9 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
HpaG806659
Hyaloperonospora arabidopsidis
HpaG806659
N
PITG_03374
Phytophthora infestans
PITG_03374
N
Physo131733
Phytophthora sojae
Physo131733
N
PYU1_G000825
Pythium ultimum
PYU1_G000825
N
maker-pve_contig_534-fgenesh-gene-0.4
Pythium vexans
maker-pve_contig_534-fgenesh-gene-0.4
N