CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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mgf000895m
(
Mimulus guttatus
)
Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00046 (Homeobox)
IPR001356
mgf000895m
T227669_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
PK19166.1
M01249_2.00
Cannabis sativa
CCMCTAWY
RWTAGKGG
PBM
Lambert et al.(2019)
pTH11273
0.604
0.661
For this family, TFs with SR scores >
0.599
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
mgf000895m
Homeodomain
689
744
KRPLKRLGEATTQRLYVSFSENQYPQRAAKENLANELGITVRQVSKWFENARWSYN
Links
Other
Homeodomain
family TFs
Other
Mimulus guttatus
TFs
4 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
PK19166.1
Cannabis sativa
PK19166.1
D
0.604
Gorai.012G148900
Gossypium raimondii
Gorai.012G148900
I
0.599
mgf002707m
Mimulus guttatus
mgf002707m
I
0.867
HAT3.1
Vitis vinifera
VIT_03s0091g00290
I
0.624