Gorai.012G148900 (Gossypium raimondii)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00046 (Homeobox) IPR001356 Gorai.012G148900 T228810_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PK19166.1
M01249_2.00 		Cannabis sativa
CCMCTAWY
RWTAGKGG		 PBM
Lambert et al.(2019)
pTH11273 		0.692 0.765
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Gorai.012G148900.1 Homeodomain 874 924
Gorai.012G148900.2 Homeodomain 874 924

Links

Other Homeodomain family TFs
Other Gossypium raimondii TFs

7 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
HAT3.1 Vitis vinifera VIT_03s0091g00290 I 0.724
PK19166.1 Cannabis sativa PK19166.1 D 0.692
Lus10024826.g Linum usitatissimum Lus10024826.g I 0.665
Lus10018741.g Linum usitatissimum Lus10018741.g I 0.620
mgf000895m Mimulus guttatus mgf000895m I 0.599
mgf002707m Mimulus guttatus mgf002707m I 0.599