CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Lus10018741.g
(
Linum usitatissimum
)
Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00046 (Homeobox)
IPR001356
Lus10018741.g
T228885_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
PK19166.1
M01249_2.00
Cannabis sativa
CCMCTAWY
RWTAGKGG
PBM
Lambert et al.(2019)
pTH11273
0.609
0.566
For this family, TFs with SR scores >
0.599
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Lus10018741
Homeodomain
621
673
YKKLGEATIQRLRQSFVENRYPNHSTKEKLAKELELTVRQVGKWFENARWNYN
Links
Other
Homeodomain
family TFs
Other
Linum usitatissimum
TFs
4 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Lus10024826.g
Linum usitatissimum
Lus10024826.g
I
0.810
Gorai.012G148900
Gossypium raimondii
Gorai.012G148900
I
0.620
HAT3.1
Vitis vinifera
VIT_03s0091g00290
I
0.614
PK19166.1
Cannabis sativa
PK19166.1
D
0.609