Eucgr.G03036 (Eucalyptus grandis)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00046 (Homeobox) IPR001356 Eucgr.G03036 T228484_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
WUS
M06905_2.00 		Arabidopsis thaliana
TRAWTGAWTGA
TCAWTCAWTYA		 Dap-seq
OMalley et al.(2016)
WUS1_col_a 		0.673 0.667
WUS
M06906_2.00 		Arabidopsis thaliana
TGAWTGAWTGW
WCAWTCAWTCA		 Dap-seq
OMalley et al.(2016)
WUS1_colamp_a 		0.673 0.667
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Eucgr.G03036.1 Homeodomain 30 91

Links

Other Homeodomain family TFs
Other Eucalyptus grandis TFs

440 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ASIM_0000060401 Anisakis simplex ASIM_0000060401 N 0.000
ASIM_0001450801 Anisakis simplex ASIM_0001450801 N 0.000
ACHR008505 Anopheles christyi ACHR008505 N 0.000
ACUA020431 Anopheles culicifacies ACUA020431 N 0.000
AEPI010384 Anopheles epiroticus AEPI010384 N 0.000
BGLB006778 Biomphalaria glabrata BGLB006778 N 0.000
e_gw.11.656.1 Branchiostoma floridae e_gw.11.656.1 N 0.000
GPLIN_000747600 Globodera pallida GPLIN_000747600 N 0.000
GPLIN_001545800 Globodera pallida GPLIN_001545800 N 0.000
augustus_masked-nMf.1.1.scaf10580-processed-gene-0.0 Meloidogyne floridensis augustus_masked-nMf.1.1.scaf10580-processed-gene-0.0 N 0.000
maker-nMf.1.1.scaf05303-snap-gene-0.9 Meloidogyne floridensis maker-nMf.1.1.scaf05303-snap-gene-0.9 N 0.000
Minc14640 Meloidogyne incognita Minc14640 N 0.000
ENSNLEG00000012707 Nomascus leucogenys ENSNLEG00000012707 N 0.000
Ocbimv22024994m.g Octopus bimaculoides Ocbimv22024994m.g N 0.000
SBAD_0000185501 Soboliphyme baturini SBAD_0000185501 N 0.000
nkx6.1 Takifugu rubripes ENSTRUG00000018648 I 0.000