Lus10016026.g (Linum usitatissimum)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00046 (Homeobox) IPR001356 Lus10016026.g T228871_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
GRMZM2G038252
M02137_2.00 		Zea mays
HTRATTGV
BCAATYAD		 PBM
Weirauch et al.(2014)
pTH6141 		0.764 0.667
WOX13
M02049_2.00 		Arabidopsis thaliana
YTGATTGA
TCAATCAR		 PBM
Weirauch et al.(2014)
pTH6461 		0.764 0.632
WOX13
M00866_2.00 		Arabidopsis thaliana
NNTGATTGAN
NTCAATCANN		 PBM
Franco-Zorrilla et al.(2014)
WOX13 		0.764 0.632
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Lus10016026 Homeodomain 98 159

Links

Other Homeodomain family TFs
Other Linum usitatissimum TFs

181 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AAEL009092 Aedes aegypti AAEL009092 N
Alligator_sinensis_CCG004678.1 Alligator sinensis Alligator_sinensis_CCG004678.1 N
Alligator_sinensis_CCG000180.1 Alligator sinensis Alligator_sinensis_CCG000180.1 N
AALB003420 Anopheles albimanus AALB003420 N
AARA002212 Anopheles arabiensis AARA002212 N
AATE002410 Anopheles atroparvus AATE002410 N
ACHR009221 Anopheles christyi ACHR009221 N
ADAC010420 Anopheles darlingi ADAC010420 N
AEPI009380 Anopheles epiroticus AEPI009380 N
AFAF012002 Anopheles farauti AFAF012002 N
AGAP001761 Anopheles gambiae AGAP001761 N
AMEC017514 Anopheles melas AMEC017514 N
AMEM008456 Anopheles merus AMEM008456 N
AQUA000629 Anopheles quadriannulatus AQUA000629 N
Afo_R008528 Aptenodytes forsteri Afo_R008528 N
ENSAMXG00000012483 Astyanax mexicanus ENSAMXG00000012483 N
e_gw.479.83.1 Branchiostoma floridae e_gw.479.83.1 N
estExt_gwp.C_860189 Branchiostoma floridae estExt_gwp.C_860189 N
CBN30846 Caenorhabditis brenneri CBN30846 N
Cflo_01607--XP_001123059.1_APIME Camponotus floridanus Cflo_01607--XP_001123059.1_APIME N
Cmyd_10017930 Chelonia mydas Cmyd_10017930 N
CLEC001936 Cimex lectularius CLEC001936 N
ENSCSAVG00000011823 Ciona savignyi ENSCSAVG00000011823 N
CpipJ_CPIJ012963 Culex pipiens CpipJ_CPIJ012963 N
CPIJ012963 Culex quinquefasciatus CPIJ012963 N
KGM_15429 Danaus plexippus KGM_15429 N
KGM_16996 Danaus plexippus KGM_16996 N
cers3b Danio rerio ENSDARG00000036337 N
cers4b Danio rerio ENSDARG00000018619 N
YQE_11876 Dendroctonus ponderosae YQE_11876 N
ENSGMOG00000018099 Gadus morhua ENSGMOG00000018099 N
ENSGACG00000002760 Gasterosteus aculeatus ENSGACG00000002760 N
Hsal_14209--XP_001123059.1_APIME Harpegnathos saltator Hsal_14209--XP_001123059.1_APIME N
HMEL006147 Heliconius melpomene HMEL006147 N
HelroG82517 Helobdella robusta HelroG82517 N
LotgiG226091 Lottia gigantea LotgiG226091 N
ENSMGAG00000017003 Meleagris gallopavo ENSMGAG00000017003 N
MCINX005367 Melitaea cinxia MCINX005367 N
ENSMICG00000014767 Microcebus murinus ENSMICG00000014767 N
ENSMICG00000017321 Microcebus murinus ENSMICG00000017321 N
Myotis_brandtii_Lass6_10034918 Myotis brandtii Myotis_brandtii_Lass6_10034918 N
Ocbimv22016239m.g Octopus bimaculoides Ocbimv22016239m.g N
Ogr00854 Ophisaurus gracilis Ogr00854 N
ENSONIG00000017329 Oreochromis niloticus ENSONIG00000017329 N
ENSONIG00000019701 Oreochromis niloticus ENSONIG00000019701 N
CERS5 Oryzias latipes ENSORLG00000010219 N
ENSOARG00000017904 Ovis aries ENSOARG00000017904 N
ENSPMAG00000008848 Petromyzon marinus ENSPMAG00000008848 N
ENSPFOG00000013551 Poecilia formosa ENSPFOG00000013551 N
ENSSHAG00000001540 Sarcophilus harrisii ENSSHAG00000001540 N
ENSSHAG00000001747 Sarcophilus harrisii ENSSHAG00000001747 N
ENSSHAG00000003870 Sarcophilus harrisii ENSSHAG00000003870 N
SCUD_0001662501 Schistosoma curassoni SCUD_0001662501 N
Smp_042440 Schistosoma mansoni Smp_042440 N
SMRZ_0001121101 Schistosoma margrebowiei SMRZ_0001121101 N
SMTD_0001890201 Schistosoma mattheei SMTD_0001890201 N
SROB_0002172301 Schistosoma rodhaini SROB_0002172301 N
SINV24013 Solenopsis invicta SINV24013 N
cers2a Takifugu rubripes ENSTRUG00000012292 N
CERS5 Takifugu rubripes ENSTRUG00000010435 N
cers4b Takifugu rubripes ENSTRUG00000000191 N
CERS5 Tetraodon nigroviridis ENSTNIG00000017897 N
cers2a Tetraodon nigroviridis ENSTNIG00000017545 N
cers5.S Xenopus laevis XB-GENE-866438 N
cers3.L Xenopus laevis XB-GENE-6251639 N
AAL89720 Xenopus laevis AAL89720 N
ENSXMAG00000010322 Xiphophorus maculatus ENSXMAG00000010322 N
L798_00373 Zootermopsis nevadensis L798_00373 N