MDP0000192108 (Malus domestica)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00046 (Homeobox) IPR001356 MDP0000192108 T229007_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
RLT1
M02038_2.00 		Arabidopsis thaliana
NDHTCWWN
NWWGADHN		 PBM
Weirauch et al.(2014)
pTH5432 		0.855 0.895
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
MDP0000192108 Homeodomain 29 85

Links

Other Homeodomain family TFs
Other Malus domestica TFs

111 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
M378DRAFT_157099 Amanita muscaria M378DRAFT_157099 N 0.000
BOTBODRAFT_169843 Botryobasidium botryosum BOTBODRAFT_169843 N 0.000
CERSUDRAFT_122924 Ceriporiopsis subvermispora CERSUDRAFT_122924 I 0.000
L804_02990 Cryptococcus gattii L804_02990 N 0.000
CNE01220 Cryptococcus neoformans CNE01220 N 0.000
gtaP Dictyostelium discoideum DDB_G0295707 N 0.000
FIBRA_01283 Fibroporia radiculosa FIBRA_01283 I 0.000
FOMPIDRAFT_1125211 Fomitopsis pinicola FOMPIDRAFT_1125211 I 0.000
GALMADRAFT_239880 Galerina marginata GALMADRAFT_239880 N 0.000
GLOTRDRAFT_71884 Gloeophyllum trabeum GLOTRDRAFT_71884 N 0.000
M413DRAFT_105950 Hebeloma cylindrosporum M413DRAFT_105950 N 0.000
HETIRDRAFT_239856 Heterobasidion irregulare HETIRDRAFT_239856 I 0.000
JAAARDRAFT_32137 Jaapia argillacea JAAARDRAFT_32137 N 0.000
K443DRAFT_672745 Laccaria amethystina K443DRAFT_672745 N 0.000
LACBIDRAFT_306097 Laccaria bicolor LACBIDRAFT_306097 N 0.000
Moror_8326 Moniliophthora roreri Moror_8326 N 0.000
PAXRUDRAFT_34811 Paxillus rubicundulus PAXRUDRAFT_34811 N 0.000
PHLGIDRAFT_62123 Phlebiopsis gigantea PHLGIDRAFT_62123 N 0.000
estExt_fgeneshPB_pg.C_100077 Phycomyces blakesleeanus estExt_fgeneshPB_pg.C_100077 I 0.000
PILCRDRAFT_823114 Piloderma croceum PILCRDRAFT_823114 N 0.000
PIIN_05400 Piriformospora indica PIIN_05400 I 0.000
M404DRAFT_122029 Pisolithus tinctorius M404DRAFT_122029 N 0.000
RHTO_01872 Rhodosporidium toruloides RHTO_01872 N 0.000
SCHCODRAFT_13988 Schizophyllum commune SCHCODRAFT_13988 N 0.000
SCLCIDRAFT_1221475 Scleroderma citrinum SCLCIDRAFT_1221475 N 0.000
SERLA73DRAFT_186737 Serpula lacrymans SERLA73DRAFT_186737 N 0.000
CY34DRAFT_804807 Suillus luteus CY34DRAFT_804807 N 0.000
M407DRAFT_16768 Tulasnella calospora M407DRAFT_16768 N 0.000