Pavir.Eb03442 (Panicum virgatum)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00046 (Homeobox) IPR001356 Pavir.Eb03442 T229258_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.Eb03442.1.p Homeodomain 77 133

Links

Other Homeodomain family TFs
Other Panicum virgatum TFs

16 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
LPERR01G29010 Leersia perrieri LPERR01G29010 N 0.631
OBART01G33600 Oryza barthii OBART01G33600 N 0.695
OB01G42420 Oryza brachyantha OB01G42420 N 0.700
ORGLA01G0275300 Oryza glaberrima ORGLA01G0275300 N 0.695
OGLUM01G37810 Oryza glumaepatula OGLUM01G37810 N 0.695
BGIOSGA004593 Oryza indica BGIOSGA004593 N 0.695
OMERI01G30450 Oryza meridionalis OMERI01G30450 N 0.695
ONIVA01G38360 Oryza nivara ONIVA01G38360 N 0.695
OPUNC01G32670 Oryza punctata OPUNC01G32670 N 0.691
ORUFI01G36780 Oryza rufipogon ORUFI01G36780 N 0.695
Pavir.Ea03124 Panicum virgatum Pavir.Ea03124 N 0.662
Si000488m.g Setaria italica Si000488m.g I 0.611
Traes_3AL_F0BD265DF Triticum aestivum Traes_3AL_F0BD265DF N 0.692
TRAES3BF075200070CFD_g Triticum aestivum TRAES3BF075200070CFD_g N 0.692
Traes_3DL_8AAFB7B06 Triticum aestivum Traes_3DL_8AAFB7B06 N 0.692
TRIUR3_16941 Triticum urartu TRIUR3_16941 N 0.692