Pavir.Ea03124 (Panicum virgatum)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00046 (Homeobox) IPR001356 Pavir.Ea03124 T229245_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.Ea03124.1.p Homeodomain 102 159

Links

Other Homeodomain family TFs
Other Panicum virgatum TFs

8 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Si000488m.g Setaria italica Si000488m.g I 0.748
Sb03g036820 Sorghum bicolor Sb03g036820 I 0.737
GRMZM2G386276 Zea mays GRMZM2G386276 N 0.732
Pavir.Eb03442 Panicum virgatum Pavir.Eb03442 N 0.662
Traes_3AL_F0BD265DF Triticum aestivum Traes_3AL_F0BD265DF N 0.610
TRAES3BF075200070CFD_g Triticum aestivum TRAES3BF075200070CFD_g N 0.610
Traes_3DL_8AAFB7B06 Triticum aestivum Traes_3DL_8AAFB7B06 N 0.610
TRIUR3_16941 Triticum urartu TRIUR3_16941 N 0.610