Thhalv10015842m.g (Eutrema salsugineum)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00046 (Homeobox) IPR001356 Thhalv10015842m.g T229573_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
WUS
M06905_2.00 		Arabidopsis thaliana
TRAWTGAWTGA
TCAWTCAWTYA		 Dap-seq
OMalley et al.(2016)
WUS1_col_a 		0.669 0.649
WUS
M06906_2.00 		Arabidopsis thaliana
TGAWTGAWTGW
WCAWTCAWTCA		 Dap-seq
OMalley et al.(2016)
WUS1_colamp_a 		0.669 0.649
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Thhalv10015842m Homeodomain 26 87

Links

Other Homeodomain family TFs
Other Eutrema salsugineum TFs

437 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
nAv.1.0.1.g00022 Acanthocheilonema viteae nAv.1.0.1.g00022 I 0.000
AAEL004707 Aedes aegypti AAEL004707 I 0.000
ENSAMEG00000014091 Ailuropoda melanoleuca ENSAMEG00000014091 I 0.000
Alligator_sinensis_CCG013675.1 Alligator sinensis Alligator_sinensis_CCG013675.1 I 0.000
ENSAPLG00000004046 Anas platyrhynchos ENSAPLG00000004046 I 0.000
ACOC_0000843601 Angiostrongylus costaricensis ACOC_0000843601 I 0.000
ASIM_0001155801 Anisakis simplex ASIM_0001155801 I 0.000
HHEX Anolis carolinensis ENSACAG00000006660 I 0.000
AARA001840 Anopheles arabiensis AARA001840 I 0.000
AATE006277 Anopheles atroparvus AATE006277 I 0.000
ACHR001525 Anopheles christyi ACHR001525 I 0.000
ACOM034050 Anopheles coluzzii ACOM034050 I 0.000
ACUA024331 Anopheles culicifacies ACUA024331 I 0.000
ADIR002846 Anopheles dirus ADIR002846 I 0.000
AEPI001110 Anopheles epiroticus AEPI001110 I 0.000
AFAF018650 Anopheles farauti AFAF018650 I 0.000
AFUN007808 Anopheles funestus AFUN007808 I 0.000
AGAP001389 Anopheles gambiae AGAP001389 I 0.000
AMAM015319 Anopheles maculatus AMAM015319 I 0.000
AMEC012825 Anopheles melas AMEC012825 I 0.000
AMEM017315 Anopheles merus AMEM017315 I 0.000
AMIN000568 Anopheles minimus AMIN000568 I 0.000
AQUA006568 Anopheles quadriannulatus AQUA006568 I 0.000
ASIS014034 Anopheles sinensis ASIS014034 I 0.000
ASTEI07538 Anopheles stephensi ASTEI07538 I 0.000
Afo_R002655 Aptenodytes forsteri Afo_R002655 I 0.000
ASU_02199 Ascaris suum ASU_02199 I 0.000
ENSAMXG00000011188 Astyanax mexicanus ENSAMXG00000011188 I 0.000
BGIBMGA010054 Bombyx mori BGIBMGA010054 I 0.000
ENSBTAP00000018899-D1 Bos grunniens ENSBTAP00000018899-D1 I 0.000
HHEX Bos taurus ENSBTAG00000014217 I 0.000
e_gw.54.243.1 Branchiostoma floridae e_gw.54.243.1 I 0.000
e_gw.56.215.1 Branchiostoma floridae e_gw.56.215.1 I 0.000
Bm5107 Brugia malayi Bm5107 I 0.000
BTMF_0001400701 Brugia timori BTMF_0001400701 I 0.000
Brh_R009926 Buceros rhinoceros Brh_R009926 I 0.000
BXY_0632900 Bursaphelenchus xylophilus BXY_0632900 I 0.000
CBN29205 Caenorhabditis brenneri CBN29205 I 0.000
CBG08137 Caenorhabditis briggsae CBG08137 I 0.000
pha-2 Caenorhabditis elegans WBGene00004011 D 0.000
CRE17126 Caenorhabditis remanei CRE17126 I 0.000
HHEX Callithrix jacchus ENSCJAG00000008627 I 0.000
Aan_R007509 Calypte anna Aan_R007509 I 0.000
HHEX Canis familiaris ENSCAFG00000007502 I 0.000
CapteG110019 Capitella teleta CapteG110019 I 0.000
CapteG129537 Capitella teleta CapteG129537 I 0.000
ENSCPOG00000021993 Cavia porcellus ENSCPOG00000021993 I 0.000
Cmyd_10016939 Chelonia mydas Cmyd_10016939 I 0.000
ENSCSAG00000006543 Chlorocebus sabaeus ENSCSAG00000006543 I 0.000
HHEX Choloepus hoffmanni ENSCHOG00000005837 I 0.000
hex Ciona intestinalis ENSCING00000001270 I 0.000
ENSCSAVG00000001801 Ciona savignyi ENSCSAVG00000001801 I 0.000
CGI_10025054 Crassostrea gigas CGI_10025054 I 0.000
CpipJ_CPIJ003318 Culex pipiens CpipJ_CPIJ003318 I 0.000
CPIJ003318 Culex quinquefasciatus CPIJ003318 I 0.000
KGM_13906 Danaus plexippus KGM_13906 I 0.000
CABZ01079847.1 Danio rerio ENSDARG00000098231 I 0.000
DAPPUDRAFT_229438 Daphnia pulex DAPPUDRAFT_229438 I 0.000
HHEX Dasypus novemcinctus ENSDNOG00000041940 I 0.000
nDi.2.2.2.g05290 Dirofilaria immitis nDi.2.2.2.g05290 I 0.000
DME_0000899101 Dracunculus medinensis DME_0000899101 I 0.000
GF18520 Drosophila ananassae FBgn0095538 I 0.000
GG14915 Drosophila erecta FBgn0107169 I 0.000
GH19308 Drosophila grimshawi FBgn0126773 I 0.000
HHEX Drosophila melanogaster FBgn0038852 D 0.000
GI23524 Drosophila mojavensis FBgn0146250 I 0.000
GL12681 Drosophila persimilis FBgn0150287 I 0.000
GA20065 Drosophila pseudoobscura FBgn0080061 I 0.000
GM15106 Drosophila sechellia FBgn0170026 I 0.000
GD20010 Drosophila simulans FBgn0191493 I 0.000
GJ10276 Drosophila virilis FBgn0197562 I 0.000
GK13080 Drosophila willistoni FBgn0215089 I 0.000
HHEX Echinops telfairi ENSETEG00000009524 N 0.000
HHEX Equus caballus ENSECAG00000005199 I 0.000
ENSEEUG00000003019 Erinaceus europaeus ENSEEUG00000003019 N 0.000
HHEX Felis catus ENSFCAG00000023875 I 0.000
ENSFALG00000007921 Ficedula albicollis ENSFALG00000007921 I 0.000
ENSGMOG00000011697 Gadus morhua ENSGMOG00000011697 I 0.000
ENSGALG00000029169 Gallus gallus ENSGALG00000029169 I 0.000
HHEX Gasterosteus aculeatus ENSGACG00000015385 I 0.000
Gfo_R002376 Geospiza fortis Gfo_R002376 I 0.000
GPLIN_000004000 Globodera pallida GPLIN_000004000 I 0.000
ENSGGOG00000026464 Gorilla gorilla ENSGGOG00000026464 I 0.000
ENSGGOG00000027676 Gorilla gorilla ENSGGOG00000027676 I 0.000
HCOI01904700 Haemonchus contortus HCOI01904700 I 0.000
HPLM_0000551901 Haemonchus placei HPLM_0000551901 I 0.000
HMEL004646 Heliconius melpomene HMEL004646 I 0.000
HelroG80789 Helobdella robusta HelroG80789 I 0.000
HHEX Homo sapiens ENSG00000152804 I 0.000
ENSSTOG00000006255 Ictidomys tridecemlineatus ENSSTOG00000006255 I 0.000
ENSLACG00000009588 Latimeria chalumnae ENSLACG00000009588 I 0.000
ENSLACG00000014170 Latimeria chalumnae ENSLACG00000014170 I 0.000
ENSLOCG00000007051 Lepisosteus oculatus ENSLOCG00000007051 I 0.000
nLs.2.1.2.g00270 Litomosoides sigmodontis nLs.2.1.2.g00270 I 0.000
LOAG_11830 Loa loa LOAG_11830 I 0.000
LotgiG128951 Lottia gigantea LotgiG128951 I 0.000
ENSLAFG00000005359 Loxodonta africana ENSLAFG00000005359 I 0.000
LCUP007736 Lucilia cuprina LCUP007736 I 0.000
LLOJ007496 Lutzomyia longipalpis LLOJ007496 I 0.000
ENSP00000282728 Macaca fascicularis ENSP00000282728 I 0.000
HHEX Macaca mulatta ENSMMUG00000011789 I 0.000
ENSMEUG00000004291 Macropus eugenii ENSMEUG00000004291 I 0.000
MESCA008304 Megaselia scalaris MESCA008304 I 0.000
ENSMGAG00000009052 Meleagris gallopavo ENSMGAG00000009052 I 0.000
augustus_masked-nMf.1.1.scaf09384-processed-gene-0.0 Meloidogyne floridensis augustus_masked-nMf.1.1.scaf09384-processed-gene-0.0 I 0.000
MhA1_Contig193.frz3.gene1 Meloidogyne hapla MhA1_Contig193.frz3.gene1 I 0.000
ENSMICG00000014969 Microcebus murinus ENSMICG00000014969 N 0.000
HHEX Monodelphis domestica ENSMODG00000006444 I 0.000
Hhex Mus musculus ENSMUSG00000024986 I 0.000
Myotis_brandtii_KIF11_10018005 Myotis brandtii Myotis_brandtii_KIF11_10018005 I 0.000
ENSMLUG00000013333 Myotis lucifugus ENSMLUG00000013333 I 0.000
ENSMLUG00000024763 Myotis lucifugus ENSMLUG00000024763 I 0.000
NEMVEDRAFT_v1g39891 Nematostella vectensis NEMVEDRAFT_v1g39891 I 0.000
NBR_0000887601 Nippostrongylus brasiliensis NBR_0000887601 I 0.000
HHEX Ochotona princeps ENSOPRG00000003896 I 0.000
OFLC_0000354301 Onchocerca flexuosa OFLC_0000354301 I 0.000
nOo.2.0.1.g09114 Onchocerca ochengi nOo.2.0.1.g09114 I 0.000
WBGene00240685 Onchocerca volvulus WBGene00240685 I 0.000
Ogr00908 Ophisaurus gracilis Ogr00908 I 0.000
ENSONIG00000007247 Oreochromis niloticus ENSONIG00000007247 I 0.000
HHEX Oryctolagus cuniculus ENSOCUG00000016719 I 0.000
HHEX Otolemur garnettii ENSOGAG00000015201 I 0.000
HHEX Pan troglodytes ENSPTRG00000002760 I 0.000
ENSPANG00000021555 Papio anubis ENSPANG00000021555 I 0.000
PTRK_0000720600 Parastrongyloides trichosuri PTRK_0000720600 I 0.000
ENSPSIG00000015884 Pelodiscus sinensis ENSPSIG00000015884 I 0.000
ENSPMAG00000009445 Petromyzon marinus ENSPMAG00000009445 I 0.000
ENSPFOG00000009869 Poecilia formosa ENSPFOG00000009869 I 0.000
Pvit_14369 Pogona vitticeps Pvit_14369 I 0.000
ENSPPYG00000002486 Pongo abelii ENSPPYG00000002486 I 0.000
scaffold24-EXSNAP2012.65 Pristionchus exspectatus scaffold24-EXSNAP2012.65 I 0.000
HHEX Pteropus vampyrus ENSPVAG00000007094 I 0.000
Hhex Rattus norvegicus ENSRNOG00000016595 I 0.000
RSKR_0000094800 Rhabditophanes kr3021 RSKR_0000094800 I 0.000
nRc.2.0.1.g06585 Romanomermis culicivorax nRc.2.0.1.g06585 I 0.000
Sakowv30040087m.g Saccoglossus kowalevskii Sakowv30040087m.g I 0.000
ENSSHAG00000018185 Sarcophilus harrisii ENSSHAG00000018185 I 0.000
L596_g25649 Steinernema carpocapsae L596_g25649 I 0.000
L889_g29725 Steinernema feltiae L889_g29725 I 0.000
L898_g1404 Steinernema monticolum L898_g1404 I 0.000
L892_g7017 Steinernema scapterisci L892_g7017 I 0.000
SMAR000779 Strigamia maritima SMAR000779 I 0.000
SPU_027215 Strongylocentrotus purpuratus SPU_027215 I 0.000
SPAL_0000841600 Strongyloides papillosus SPAL_0000841600 I 0.000
SSTP_0000145800 Strongyloides stercoralis SSTP_0000145800 I 0.000
SVE_1799000 Strongyloides venezuelensis SVE_1799000 I 0.000
ENSSSCG00000010472 Sus scrofa ENSSSCG00000010472 I 0.000
ENSTGUG00000008924 Taeniopygia guttata ENSTGUG00000008924 I 0.000
ENSTGUG00000013882 Taeniopygia guttata ENSTGUG00000013882 I 0.000
HHEX Takifugu rubripes ENSTRUG00000004234 I 0.000
TELCIR_00798 Teladorsagia circumcincta TELCIR_00798 I 0.000
tetur29g00560 Tetranychus urticae tetur29g00560 I 0.000
HHEX Tetraodon nigroviridis ENSTNIG00000005879 I 0.000
TCLT_0000379201 Thelazia callipaeda TCLT_0000379201 I 0.000
TC004555 Tribolium castaneum TC004555 I 0.000
TriadG9560 Trichoplax adhaerens TriadG9560 I 0.000
ENSTBEG00000001339 Tupaia belangeri ENSTBEG00000001339 I 0.000
HHEX Tursiops truncatus ENSTTRG00000012365 I 0.000
Tal_R011621 Tyto alba Tal_R011621 I 0.000
HHEX Vicugna pacos ENSVPAG00000009916 I 0.000
WUBG_10995 Wuchereria bancrofti WUBG_10995 I 0.000
hhex.L Xenopus laevis XB-GENE-865680 I 0.000
hhex Xenopus tropicalis XB-GENE-487159 I 0.000
L798_02156 Zootermopsis nevadensis L798_02156 I 0.000