CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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maker-nMf.1.1.scaf03287-augustus-gene-0.5
(
Meloidogyne floridensis
)
Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00046 (Homeobox)
IPR001356
maker-nMf.1.1.scaf03287-augustus-gene-0.5
T235035_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
maker-nMf.1.1.scaf03287-augustus-gene-0.5-mRNA-1
Homeodomain
226
276
DQYRIVYNEFQRIELEKAFVNLNYVTAEVKAELSSRLHLTERQIKIWFQNR
Links
Other
Homeodomain
family TFs
Other
Meloidogyne floridensis
TFs
14 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
nAv.1.0.1.g01517
Acanthocheilonema viteae
nAv.1.0.1.g01517
I
0.608
ANCCAN_03696
Ancylostoma caninum
ANCCAN_03696
I
0.651
ASIM_0001558001
Anisakis simplex
ASIM_0001558001
I
0.619
HPLM_0000060301
Haemonchus placei
HPLM_0000060301
I
0.651
HelroG128744
Helobdella robusta
HelroG128744
N
0.726
nLs.2.1.2.g09719
Litomosoides sigmodontis
nLs.2.1.2.g09719
I
0.619
Minc16296
Meloidogyne incognita
Minc16296
I
0.696
NECAME_06333
Necator americanus
NECAME_06333
I
0.651
OESDEN_19696
Oesophagostomum dentatum
OESDEN_19696
I
0.651
Ppa-pal-1
Pristionchus pacificus
PPA02358
I
0.646
SVUK_0001504901
Strongylus vulgaris
SVUK_0001504901
I
0.651
TCNE_0001280701
Toxocara canis
TCNE_0001280701
I
0.608
D917_04639
Trichinella nativa
D917_04639
N
0.661
WUBG_02562
Wuchereria bancrofti
WUBG_02562
I
0.608