SVUK_0001504901 (Strongylus vulgaris)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00046 (Homeobox) IPR001356 SVUK_0001504901 T236620_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
pal-1
M02183_2.00 		Caenorhabditis elegans
GYAATWAA
TTWATTRC		 PBM
Weirauch et al.(2014)
pTH6016 		0.676 0.824
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
SVUK_0001504901-mRNA-1 Homeodomain 39 89

Links

Other Homeodomain family TFs
Other Strongylus vulgaris TFs

50 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ANCCAN_03696 Ancylostoma caninum ANCCAN_03696 I 0.867
HPLM_0000060301 Haemonchus placei HPLM_0000060301 I 0.867
NECAME_06333 Necator americanus NECAME_06333 I 0.867
OESDEN_19696 Oesophagostomum dentatum OESDEN_19696 I 0.867
Ppa-pal-1 Pristionchus pacificus PPA02358 I 0.821
ASIM_0001558001 Anisakis simplex ASIM_0001558001 I 0.815
nLs.2.1.2.g09719 Litomosoides sigmodontis nLs.2.1.2.g09719 I 0.815
WUBG_02562 Wuchereria bancrofti WUBG_02562 I 0.805
nAv.1.0.1.g01517 Acanthocheilonema viteae nAv.1.0.1.g01517 I 0.805
TCNE_0001280701 Toxocara canis TCNE_0001280701 I 0.805
HPBE_0001563701 Heligmosomoides bakeri HPBE_0001563701 I 0.790
NBR_0000825001 Nippostrongylus brasiliensis NBR_0000825001 I 0.790
LOAG_15485 Loa loa LOAG_15485 I 0.739
ALUE_0000232801 Ascaris lumbricoides ALUE_0000232801 I 0.739
BTMF_0001276401 Brugia timori BTMF_0001276401 I 0.729
SMUV_0000918401 Syphacia muris SMUV_0000918401 I 0.725
EVEC_0000579401 Enterobius vermicularis EVEC_0000579401 I 0.715
DICVIV_02748 Dictyocaulus viviparus DICVIV_02748 N 0.710
OESDEN_25610 Oesophagostomum dentatum OESDEN_25610 N 0.710
ACAC_0001014401 Angiostrongylus cantonensis ACAC_0001014401 N 0.698
ACOC_0000988901 Angiostrongylus costaricensis ACOC_0000988901 N 0.698
HCOI01745700 Haemonchus contortus HCOI01745700 I 0.696
PEQ_0000241601 Parascaris equorum PEQ_0000241601 N 0.690
TCNE_0000481301 Toxocara canis TCNE_0000481301 N 0.690
TCLT_0000255601 Thelazia callipaeda TCLT_0000255601 I 0.683
CJA02391 Caenorhabditis japonica CJA02391 I 0.678
CBG17980 Caenorhabditis briggsae CBG17980 I 0.676
CBN10543 Caenorhabditis brenneri CBN10543 I 0.676
CRE20227 Caenorhabditis remanei CRE20227 I 0.676
pal-1 Caenorhabditis elegans WBGene00003912 D 0.676
PTRK_0001336600 Parastrongyloides trichosuri PTRK_0001336600 I 0.668
OFLC_0000632501 Onchocerca flexuosa OFLC_0000632501 I 0.667
SPAL_0001492700 Strongyloides papillosus SPAL_0001492700 I 0.658
SSTP_0000576200 Strongyloides stercoralis SSTP_0000576200 I 0.658
SVE_0397300 Strongyloides venezuelensis SVE_0397300 I 0.658
WBGene00246390 Onchocerca volvulus WBGene00246390 I 0.656
nDi.2.2.2.g06197 Dirofilaria immitis nDi.2.2.2.g06197 I 0.656
RSKR_0001046900 Rhabditophanes kr3021 RSKR_0001046900 I 0.654
scaffold1496-EXSNAP2012.4 Pristionchus exspectatus scaffold1496-EXSNAP2012.4 N 0.654
scaffold580-EXSNAP2012.2 Pristionchus exspectatus scaffold580-EXSNAP2012.2 N 0.654
maker-nMf.1.1.scaf03287-augustus-gene-0.5 Meloidogyne floridensis maker-nMf.1.1.scaf03287-augustus-gene-0.5 N 0.651
Bm2663 Brugia malayi Bm2663 I 0.644
ASU_04180 Ascaris suum ASU_04180 I 0.644
EEL_0000223001 Elaeophora elaphi EEL_0000223001 I 0.644
EFV58119 Trichinella spiralis EFV58119 I 0.632
ENSMODG00000025439 Monodelphis domestica ENSMODG00000025439 I 0.626
SMUV_0000190101 Syphacia muris SMUV_0000190101 I 0.617
cdx1 Xenopus tropicalis XB-GENE-485396 I 0.611
HelroG128744 Helobdella robusta HelroG128744 N 0.610
ENSAPLG00000006821 Anas platyrhynchos ENSAPLG00000006821 I 0.608