CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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scaffold580-EXSNAP2012.2
(
Pristionchus exspectatus
)
Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00046 (Homeobox)
IPR001356
scaffold580-EXSNAP2012.2
T235995_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
scaffold580-EXSNAP2012.2
Homeodomain
1
47
MVYSDYIRLELEKEFHMNQFINADRKADLATKLNLTERQIKIWFQNS
Links
Other
Homeodomain
family TFs
Other
Pristionchus exspectatus
TFs
19 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
scaffold1496-EXSNAP2012.4
Pristionchus exspectatus
scaffold1496-EXSNAP2012.4
N
0.867
PEQ_0000241601
Parascaris equorum
PEQ_0000241601
N
0.814
TCNE_0000481301
Toxocara canis
TCNE_0000481301
N
0.814
ACAC_0001014401
Angiostrongylus cantonensis
ACAC_0001014401
N
0.811
ACOC_0000988901
Angiostrongylus costaricensis
ACOC_0000988901
N
0.811
DICVIV_02748
Dictyocaulus viviparus
DICVIV_02748
N
0.811
OESDEN_25610
Oesophagostomum dentatum
OESDEN_25610
N
0.811
Ppa-pal-1
Pristionchus pacificus
PPA02358
I
0.699
WUBG_02562
Wuchereria bancrofti
WUBG_02562
I
0.667
nAv.1.0.1.g01517
Acanthocheilonema viteae
nAv.1.0.1.g01517
I
0.667
ASIM_0001558001
Anisakis simplex
ASIM_0001558001
I
0.657
nLs.2.1.2.g09719
Litomosoides sigmodontis
nLs.2.1.2.g09719
I
0.657
TCNE_0001280701
Toxocara canis
TCNE_0001280701
I
0.657
ANCCAN_03696
Ancylostoma caninum
ANCCAN_03696
I
0.654
HPLM_0000060301
Haemonchus placei
HPLM_0000060301
I
0.654
NECAME_06333
Necator americanus
NECAME_06333
I
0.654
OESDEN_19696
Oesophagostomum dentatum
OESDEN_19696
I
0.654
SVUK_0001504901
Strongylus vulgaris
SVUK_0001504901
I
0.654
ANCDUO_19178
Ancylostoma duodenale
ANCDUO_19178
N
0.609