T265_09553 (Opisthorchis viverrini)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00046 (Homeobox) IPR001356 T265_09553 T236669_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Irx4
M00416_2.00 		Mus musculus
NNNDAMAH
DTKTHNNN		 PBM
Berger et al.(2008)
Irx4_2242 		0.853 0.946
ara
M06518_2.00 		Drosophila melanogaster
WWACA
TGTWW		 B1H
Mathelier et al.(2014)
MA0210.1 		0.800 0.929
ara
M06313_2.00 		Drosophila melanogaster
TGTWWWNN
NNWWWACA		 B1H
Zhu et al.(2011)
Ara_Cell_FBgn0015904 		0.800 0.929
ara
M06314_2.00 		Drosophila melanogaster
DWWACA
TGTWWH		 B1H
Zhu et al.(2011)
Ara_SOLEXA_FBgn0015904 		0.800 0.929
Irx6
M00456_2.00 		Mus musculus
NNDAHWN
NWDTHNN		 PBM
Berger et al.(2008)
Irx6_2623 		0.800 0.911
caup
M06519_2.00 		Drosophila melanogaster
WAACA
TGTTW		 B1H
Mathelier et al.(2014)
MA0217.1 		0.792 0.893
caup
M06315_2.00 		Drosophila melanogaster
HWDWAACA
TGTTWHWD		 B1H
Zhu et al.(2011)
Caup_Cell_FBgn0015919 		0.792 0.893
caup
M06316_2.00 		Drosophila melanogaster
NDDACA
TGTHHN		 B1H
Zhu et al.(2011)
Caup_SOLEXA_FBgn0015919 		0.792 0.893
Irx2
M00386_2.00 		Mus musculus
NNDACAHNN
NNDTGTHNN		 PBM
Berger et al.(2008)
Irx2_0900 		0.780 0.875
Irx5
M00455_2.00 		Mus musculus
NNNDACAHN
NDTGTHNNN		 PBM
Berger et al.(2008)
Irx5_2385 		0.780 0.875
IRX2
M03212_2.00 		Homo sapiens
NDACAYRACAHN
NDTGTYRTGTHN		 SELEX
Jolma et al.(2013)
IRX2_1 		0.780 0.875
IRX5
M03222_2.00 		Homo sapiens
NDACAYRACAHN
NDTGTYRTGTHN		 SELEX
Jolma et al.(2013)
IRX5_1 		0.780 0.875
IRX5
M05315_2.00 		Homo sapiens
NBDTGTHNDACAYVN
NBRTGTHNDACAHVN		 SELEX
Yin et al.(2017)
IRX5_eDBD_HT-SELEX 		0.780 0.875
IRX5
M05316_2.00 		Homo sapiens
WYRYGHHNHAYRYRY
RYRYRTDNDDCRYRW		 SELEX
Yin et al.(2017)
IRX5_eDBD_Methyl-HT-SELEX 		0.780 0.875
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
T265_09553 Homeodomain 423 481

Links

Other Homeodomain family TFs
Other Opisthorchis viverrini TFs

393 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSAMEG00000006957 Ailuropoda melanoleuca ENSAMEG00000006957 I
Alligator_sinensis_CCG012951.1 Alligator sinensis Alligator_sinensis_CCG012951.1 I
ENSAPLG00000005775 Anas platyrhynchos ENSAPLG00000005775 I
ENSACAG00000002480 Anolis carolinensis ENSACAG00000002480 I
Afo_R014628 Aptenodytes forsteri Afo_R014628 I
ENSAMXG00000013017 Astyanax mexicanus ENSAMXG00000013017 I
ENSP00000331327-D1 Bos grunniens ENSP00000331327-D1 I
WT1 Bos taurus ENSBTAG00000047268 I
fgenesh2_pm.scaffold_110000013 Branchiostoma floridae fgenesh2_pm.scaffold_110000013 I
fgenesh2_pg.scaffold_80000039 Branchiostoma floridae fgenesh2_pg.scaffold_80000039 I
WT1 Callithrix jacchus ENSCJAG00000005900 I
Aan_R006616 Calypte anna Aan_R006616 I
WT1 Canis familiaris ENSCAFG00000007426 I
ENSCSAG00000005257 Chlorocebus sabaeus ENSCSAG00000005257 I
WT1 Choloepus hoffmanni ENSCHOG00000006244 I
wt1b Danio rerio ENSDARG00000007990 I
wt1a Danio rerio ENSDARG00000031420 I
WT1 Dasypus novemcinctus ENSDNOG00000003652 I
Wt1 Dipodomys ordii ENSDORG00000013725 I
WT1 Echinops telfairi ENSETEG00000000684 I
ENSECAG00000022308 Equus caballus ENSECAG00000022308 I
WT1 Felis catus ENSFCAG00000000308 I
ENSFALG00000010820 Ficedula albicollis ENSFALG00000010820 I
ENSGMOG00000012296 Gadus morhua ENSGMOG00000012296 I
WT1 Gallus gallus ENSGALG00000012115 I
wt1b Gasterosteus aculeatus ENSGACG00000016020 I
Gfo_R001970 Geospiza fortis Gfo_R001970 I
WT1 Gorilla gorilla ENSGGOG00000011586 I
WT1 Homo sapiens ENSG00000184937 D
ENSSTOG00000023716 Ictidomys tridecemlineatus ENSSTOG00000023716 I
ENSLACG00000016378 Latimeria chalumnae ENSLACG00000016378 I
ENSLOCG00000004537 Lepisosteus oculatus ENSLOCG00000004537 I
WT1 Loxodonta africana ENSLAFG00000006160 I
ENSP00000331327 Macaca fascicularis ENSP00000331327 I
WT1 Macaca mulatta ENSMMUG00000009881 I
ENSMGAG00000001489 Meleagris gallopavo ENSMGAG00000001489 I
WT1 Microcebus murinus ENSMICG00000004097 I
WT1 Monodelphis domestica ENSMODG00000009646 I
ENSMPUG00000011307 Mustela putorius furo ENSMPUG00000011307 I
Wt1 Mus musculus ENSMUSG00000016458 D
WT1 Myotis lucifugus ENSMLUG00000027523 I
ENSNLEG00000017890 Nomascus leucogenys ENSNLEG00000017890 I
ENSOPRG00000015709 Ochotona princeps ENSOPRG00000015709 I
ENSONIG00000011043 Oreochromis niloticus ENSONIG00000011043 I
ENSONIG00000005545 Oreochromis niloticus ENSONIG00000005545 I
ENSOANG00000015147 Ornithorhynchus anatinus ENSOANG00000015147 I
WT1 Oryctolagus cuniculus ENSOCUG00000005882 I
wt1 Oryzias latipes ENSORLG00000009859 I
wt1 Oryzias latipes ENSORLG00000012424 I
WT1 Otolemur garnettii ENSOGAG00000007118 I
ENSOARG00000016334 Ovis aries ENSOARG00000016334 I
WT1 Pan troglodytes ENSPTRG00000003476 I
ENSPANG00000019482 Papio anubis ENSPANG00000019482 I
ENSPSIG00000013679 Pelodiscus sinensis ENSPSIG00000013679 I
ENSPMAG00000008950 Petromyzon marinus ENSPMAG00000008950 I
ENSPFOG00000010572 Poecilia formosa ENSPFOG00000010572 I
Pvit_09510 Pogona vitticeps Pvit_09510 I
ENSPPYG00000029822 Pongo abelii ENSPPYG00000029822 I
WT1 Procavia capensis ENSPCAG00000002213 I
Wt1 Rattus norvegicus ENSRNOG00000013074 I
ENSSHAG00000017390 Sarcophilus harrisii ENSSHAG00000017390 I
ENSSARG00000000207 Sorex araneus ENSSARG00000000207 I
WT1 Sus scrofa ENSSSCG00000013316 I
WT1 Taeniopygia guttata ENSTGUG00000004906 I
wt1b Takifugu rubripes ENSTRUG00000006559 I
wt1b Tetraodon nigroviridis ENSTNIG00000013806 I
ENSVPAG00000007788 Vicugna pacos ENSVPAG00000007788 I
B7ZSG3 Xenopus laevis B7ZSG3 I
wt1.L Xenopus laevis XB-GENE-6252376 I
wt1.S Xenopus laevis XB-GENE-864792 I
B5DE03 Xenopus tropicalis B5DE03 I
wt1 Xenopus tropicalis XB-GENE-484999 I
ENSXMAG00000005139 Xiphophorus maculatus ENSXMAG00000005139 I