Hsf1 (Rattus norvegicus)
HSF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00447 (HSF_DNA-bind) IPR000232 ENSRNOG00000021732 T240401_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
HSF1
M03329_2.00 		Homo sapiens
GAANVTTCBVGAA
TTCBVGAABNTTC		 SELEX
Jolma et al.(2013)
HSF1_1 		0.670 1.000
HSF1
M03330_2.00 		Homo sapiens
GAANRTTCBAGAA
TTCTVGAAYNTTC		 SELEX
Jolma et al.(2013)
HSF1_2 		0.670 1.000
HSF1
M05523_2.00 		Homo sapiens
VGAABVTTCBVGAWN
NWTCBVGAABVTTCB		 SELEX
Yin et al.(2017)
HSF1_eDBD_HT-SELEX 		0.670 1.000
HSF1
M05525_2.00 		Homo sapiens
VGAANRTTCKVGAAN
NTTCBMGAAYNTTCB		 SELEX
Yin et al.(2017)
HSF1_FL_HT-SELEX 		0.670 1.000
HSF1
M07977_2.00 		Homo sapiens
GDCSYGGGTTCRADYCCC
GGGRHTYGAACCCRSGHC		 ChIP-seq
Gerstein et al.(2012)
HepG2_HSF1_Stanford 		0.670 1.000
HSF1
M09230_2.00 		Homo sapiens
NRGAANNTTCYRGAA
TTCYRGAANNTTCYN		 Misc
Kulakovskiy et al.(2013)
HSF1_HUMAN.H11MO.0.A 		0.670 1.000
Hsf1
M09232_2.00 		Mus musculus
NRGAANNTTCYRGAA
TTCYRGAANNTTCYN		 Misc
Kulakovskiy et al.(2013)
HSF1_MOUSE.H11MO.0.A 		0.670 1.000
HSF1
M09592_2.00 		Homo sapiens
NNBBCYRGAANNTTCYRGVV
BBCYRGAANNTTCYRGVVNN		 Misc
Heinz et al.(2010)
HepG2-HSF1_GSE31477 		0.670 1.000
Hsf1
M09593_2.00 		Mus musculus
NRGAANNTTCYRGAA
TTCYRGAANNTTCYN		 Misc
Heinz et al.(2010)
Striatum-HSF1_GSE38000 		0.670 1.000
HSF1
M10863_2.00 		Homo sapiens
NGAAHNTTCY
RGAANDTTCN		 Transfac
Matys et al.(2006)
V$HSF1_01 		0.670 1.000
HSF1
M10864_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$HSF1_Q5_01 		0.670 1.000
HSF1
M10865_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$HSF1_Q5 		0.670 1.000
HSF1
M10866_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$HSF1_Q6_01 		0.670 1.000
HSF1
M10867_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$HSF1_Q6 		0.670 1.000
HSF1
M10868_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$HSF_Q6 		0.670 1.000
HSF1
M05524_2.00 		Homo sapiens
RGAANRTTCYRGAWN
NWTCYRGAAYNTTCY		 SELEX
Yin et al.(2017)
HSF1_eDBD_Methyl-HT-SELEX 		0.670 1.000
HSF1
M05526_2.00 		Homo sapiens
RGAANVTTCYRGAWN
NWTCYRGAABNTTCY		 SELEX
Yin et al.(2017)
HSF1_FL_Methyl-HT-SELEX 		0.670 1.000
HSF4
M03325_2.00 		Homo sapiens
GAANNTTCBVGAA
TTCBVGAANNTTC		 SELEX
Jolma et al.(2013)
HSF4_1 		0.484 0.760
HSF4
M05509_2.00 		Homo sapiens
VGAABVTTCKVGAAN
NTTCBMGAABVTTCB		 SELEX
Yin et al.(2017)
HSF4_eDBD_HT-SELEX 		0.484 0.760
HSF4
M10862_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$HSF4_Q3 		0.484 0.760
HSF4
M05510_2.00 		Homo sapiens
RGAABVWDCYRGAWN
NWTCYRGHWBVTTCY		 SELEX
Yin et al.(2017)
HSF4_eDBD_Methyl-HT-SELEX 		0.484 0.760
hsf2
M02248_2.00 		Danio rerio
NNNWGTTCTATNN
NNATAGAACWNNN		 PBM
Weirauch et al.(2014)
pTH9010 		0.415 0.688
Hsf2
M09231_2.00 		Mus musculus
VGAABVTTCKVGAN
NTCBMGAABVTTCB		 Misc
Kulakovskiy et al.(2013)
HSF2_MOUSE.H11MO.0.A 		0.408 0.677
HSF2
M03324_2.00 		Homo sapiens
GAANVTTCTAGAA
TTCTAGAABNTTC		 SELEX
Jolma et al.(2013)
HSF2_1 		0.401 0.667
HSF2
M02744_2.00 		Homo sapiens
GAABGTTCTRGA
TCYAGAACVTTC		 SELEX
Jolma et al.(2010)
HSF2_dimertrimer 		0.401 0.667
HSF2
M05505_2.00 		Homo sapiens
VGAABVTTCBVGAWN
NWTCBVGAABVTTCB		 SELEX
Yin et al.(2017)
HSF2_eDBD_HT-SELEX 		0.401 0.667
HSF2
M05507_2.00 		Homo sapiens
VGAANNTTCBVGAAN
NTTCBVGAANNTTCB		 SELEX
Yin et al.(2017)
HSF2_FL_HT-SELEX 		0.401 0.667
HSF2
M09229_2.00 		Homo sapiens
VGAABVTTCKVGAN
NTCBMGAABVTTCB		 Misc
Kulakovskiy et al.(2013)
HSF2_HUMAN.H11MO.0.A 		0.401 0.667
HSF2
M10859_2.00 		Homo sapiens
VGAANNWTCB
VGAWNNTTCB		 Transfac
Matys et al.(2006)
V$HSF2_01 		0.401 0.667
HSF2
M10860_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$HSF2_02 		0.401 0.667
HSF2
M10861_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$HSF2_Q6 		0.401 0.667
HSF2
M05506_2.00 		Homo sapiens
RGAABVTTCYRGAWN
NWTCYRGAABVTTCY		 SELEX
Yin et al.(2017)
HSF2_eDBD_Methyl-HT-SELEX 		0.401 0.667
HSF2
M05508_2.00 		Homo sapiens
RGAABVTTCYRGAWN
NWTCYRGAABVTTCY		 SELEX
Yin et al.(2017)
HSF2_FL_Methyl-HT-SELEX 		0.401 0.667
Hsf
M03908_2.00 		Drosophila melanogaster
BVGAANRTTCTVGAANN
NNTTCBAGAAYNTTCBV		 SELEX
Nitta et al.(2015)
Hsf_1 		0.358 0.562
Hsf
M03909_2.00 		Drosophila melanogaster
NVGAAYNTTCBAGAANN
NNTTCTVGAANRTTCBN		 SELEX
Nitta et al.(2015)
Hsf_2 		0.358 0.562
Hsf
M03910_2.00 		Drosophila melanogaster
NVGAAYNTTCTVGAANN
NNTTCBAGAANRTTCBN		 SELEX
Nitta et al.(2015)
Hsf_3 		0.358 0.562
Hsf
M03911_2.00 		Drosophila melanogaster
NVGAANRTTCBAGAANN
NNTTCTVGAAYNTTCBN		 SELEX
Nitta et al.(2015)
Hsf_4 		0.358 0.562
Hsf
M06388_2.00 		Drosophila melanogaster
KMGAADNTTCKMGA
TCKMGAANHTTCKM		 B1H
Zhu et al.(2011)
Hsf_FlyReg_FBgn0001222 		0.358 0.562
Hsf
M10869_2.00 		Drosophila melanogaster
HTTCK
MGAAD		 Transfac
Matys et al.(2006)
I$HSF_01 		0.358 0.562
Hsf
M10870_2.00 		Drosophila melanogaster
MGAADMGAADMGAAD
HTTCKHTTCKHTTCK		 Transfac
Matys et al.(2006)
I$HSF_02 		0.358 0.562
Hsf
M10871_2.00 		Drosophila melanogaster
MGAADHTTCKHTTCK
MGAADMGAADHTTCK		 Transfac
Matys et al.(2006)
I$HSF_03 		0.358 0.562
Hsf
M10872_2.00 		Drosophila melanogaster
MGAADHTTCKMGAAD
HTTCKMGAADHTTCK		 Transfac
Matys et al.(2006)
I$HSF_04 		0.358 0.562
Hsf
M10873_2.00 		Drosophila melanogaster
HTTCKHTTCKMGAAD
HTTCKMGAADMGAAD		 Transfac
Matys et al.(2006)
I$HSF_05 		0.358 0.562
HSFB2B
M06945_2.00 		Arabidopsis thaliana
RGAANNTTCTAGAA
TTCTAGAANNTTCY		 Dap-seq
OMalley et al.(2016)
HSF7_col_a 		0.346 0.521
HSFB2B
M06946_2.00 		Arabidopsis thaliana
RGAANNTTCTAGAA
TTCTAGAANNTTCY		 Dap-seq
OMalley et al.(2016)
HSF7_colamp_a 		0.346 0.521
HSFB2A
M00869_2.00 		Arabidopsis thaliana
NNNNNTTCB
VGAANNNNN		 PBM
Franco-Zorrilla et al.(2014)
HSFB2A 		0.328 0.500
HSFB2A
M06952_2.00 		Arabidopsis thaliana
GAANNTTCYAGA
TCTRGAANNTTC		 Dap-seq
OMalley et al.(2016)
HSF6_col_a 		0.328 0.500
hsf-1
M00682_2.00 		Caenorhabditis elegans
TTCYAGAA
TTCTRGAA		 PBM
Narasimhan et al.(2015)
pTH10796 		0.325 0.531
hsf-1
M02249_2.00 		Neurospora crassa
NNNTTCBDNN
NNHVGAANNN		 PBM
Weirauch et al.(2014)
pTH8857 		0.322 0.438
ANIA_08035
M02247_2.00 		Aspergillus nidulans
NNNNTTCYRN
NYRGAANNNN		 PBM
Weirauch et al.(2014)
pTH8231 		0.322 0.448
For this family, TFs with SR scores > 0.318 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSRNOP00000047030 HSF 18 119

Links

Other HSF family TFs
Other Rattus norvegicus TFs

673 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
F775_29547 Aegilops tauschii F775_29547 N
BRADI1G25470 Brachypodium distachyon BRADI1G25470 N
MLOC_59511 Hordeum vulgare MLOC_59511 N
LPERR07G15060 Leersia perrieri LPERR07G15060 N
OBART07G17630 Oryza barthii OBART07G17630 N
OGLUM07G17270 Oryza glumaepatula OGLUM07G17270 N
BGIOSGA024146 Oryza indica BGIOSGA024146 N
OLONG_014592 Oryza longistaminata OLONG_014592 N
OMERI07G14510 Oryza meridionalis OMERI07G14510 N
ONIVA07G15940 Oryza nivara ONIVA07G15940 N
OPUNC07G16420 Oryza punctata OPUNC07G16420 N
ORUFI07G18300 Oryza rufipogon ORUFI07G18300 N
OS07G0543000 Oryza sativa OS07G0543000 N
Pavir.Ba00731 Panicum virgatum Pavir.Ba00731 N
Pavir.J35704 Panicum virgatum Pavir.J35704 N
Si030877m.g Setaria italica Si030877m.g N
Solyc02g079970.2 Solanum lycopersicum Solyc02g079970.2 N
PGSC0003DMG400019263 Solanum tuberosum PGSC0003DMG400019263 I
PGSC0003DMG400021717 Solanum tuberosum PGSC0003DMG400021717 N
Sb02g035580 Sorghum bicolor Sb02g035580 N
Traes_2AS_FE9AC4EDD Triticum aestivum Traes_2AS_FE9AC4EDD N
Traes_2BS_7190FAD1A Triticum aestivum Traes_2BS_7190FAD1A N
Traes_2DS_B05DDA181 Triticum aestivum Traes_2DS_B05DDA181 N
GRMZM2G058451 Zea mays GRMZM2G058451 N