IRF4 (Choloepus hoffmanni)
IRF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00605 (IRF) IPR001346 ENSCHOG00000012417 T243967_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Irf4
M00175_2.00 		Mus musculus
NNNYGAWASN
NSTWTCRNNN		 PBM
Badis et al.(2009)
Irf4_3476 		1.000 1.000
IRF4
M03334_2.00 		Homo sapiens
HCGAAACCGAAACYW
WRGTTTCGGTTTCGD		 SELEX
Jolma et al.(2013)
IRF4_1 		1.000 1.000
IRF4
M05539_2.00 		Homo sapiens
NYGAAACYGAAACYN
NRGTTTCRGTTTCRN		 SELEX
Yin et al.(2017)
IRF4_FL_HT-SELEX 		1.000 1.000
IRF4
M07978_2.00 		Homo sapiens
DNDVNNGWWVTGAVWVWN
NWBWBTCABWWCNNBHNH		 ChIP-seq
Gerstein et al.(2012)
GM12878_IRF4_HudsonAlpha 		1.000 1.000
IRF4
M09235_2.00 		Homo sapiens
NDWDRRGGAASTGARAVH
DBTYTCASTTCCYYHWHN		 Misc
Kulakovskiy et al.(2013)
IRF4_HUMAN.H11MO.0.A 		1.000 1.000
Irf4
M09243_2.00 		Mus musculus
NDAWVVRGAASTGARAVH
DBTYTCASTTCYBBWTHN		 Misc
Kulakovskiy et al.(2013)
IRF4_MOUSE.H11MO.0.A 		1.000 1.000
IRF4
M09595_2.00 		Homo sapiens
HNYGAAASYD
HRSTTTCRND		 Misc
Heinz et al.(2010)
GM12878-IRF4_GSE32465 		1.000 1.000
IRF4
M10885_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$IRF4_07 		1.000 1.000
IRF4
M10886_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$IRF4_08 		1.000 1.000
IRF4
M10887_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$IRF4_Q5_01 		1.000 1.000
IRF4
M10888_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$IRF4_Q5 		1.000 1.000
IRF4
M10889_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$IRF4_Q6 		1.000 1.000
IRF4
M05540_2.00 		Homo sapiens
NYGAAASYGAWASHN
NDSTWTCRSTTTCRN		 SELEX
Yin et al.(2017)
IRF4_FL_Methyl-HT-SELEX 		1.000 1.000
IRF8
M03335_2.00 		Homo sapiens
HCGAAACYGAAACY
RGTTTCRGTTTCGD		 SELEX
Jolma et al.(2013)
IRF8_1 		0.804 0.804
IRF8
M03336_2.00 		Homo sapiens
HCGAAACCGAAACT
AGTTTCGGTTTCGD		 SELEX
Jolma et al.(2013)
IRF8_2 		0.804 0.804
IRF8
M05541_2.00 		Homo sapiens
NYGAAASYGAAASHN
NDSTTTCRSTTTCRN		 SELEX
Yin et al.(2017)
IRF8_eDBD_HT-SELEX 		0.804 0.804
IRF8
M05543_2.00 		Homo sapiens
NCGAAACYGAAACYN
NRGTTTCRGTTTCGN		 SELEX
Yin et al.(2017)
IRF8_FL_HT-SELEX 		0.804 0.804
IRF8
M09236_2.00 		Homo sapiens
NDDDRRGGAASTGAAASYNN
NNRSTTTCASTTCCYYHHHN		 Misc
Kulakovskiy et al.(2013)
IRF8_HUMAN.H11MO.0.B 		0.804 0.804
Irf8
M09246_2.00 		Mus musculus
NDDDRRGGAASTGAAASYNN
NNRSTTTCASTTCCYYHHHN		 Misc
Kulakovskiy et al.(2013)
IRF8_MOUSE.H11MO.0.A 		0.804 0.804
IRF8
M10890_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$ICSBP_Q6 		0.804 0.804
IRF8
M10891_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$IRF8_Q6 		0.804 0.804
IRF8
M05542_2.00 		Homo sapiens
NYGAAASYGAAASYN
NRSTTTCRSTTTCRN		 SELEX
Yin et al.(2017)
IRF8_eDBD_Methyl-HT-SELEX 		0.804 0.804
IRF8
M05544_2.00 		Homo sapiens
NYGAAASYGAAACYD
HRGTTTCRSTTTCRN		 SELEX
Yin et al.(2017)
IRF8_FL_Methyl-HT-SELEX 		0.804 0.804
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSCHOP00000010993 IRF 1 56

Links

Other IRF family TFs
Other Choloepus hoffmanni TFs

62 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ANCCAN_02239 Ancylostoma caninum ANCCAN_02239 N 0.000
ANCDUO_12773 Ancylostoma duodenale ANCDUO_12773 N 0.000
ACAC_0001011001 Angiostrongylus cantonensis ACAC_0001011001 N 0.000
CBN17666 Caenorhabditis brenneri CBN17666 N 0.000
CBG18298 Caenorhabditis briggsae CBG18298 N 0.000
cey-2 Caenorhabditis elegans WBGene00000473 N 0.000
cey-3 Caenorhabditis elegans WBGene00000474 N 0.000
cey-4 Caenorhabditis elegans WBGene00000475 N 0.000
CJA04706 Caenorhabditis japonica CJA04706 N 0.000
CRE04844 Caenorhabditis remanei CRE04844 N 0.000
CGOC_0000831401 Cylicostephanus goldi CGOC_0000831401 N 0.000
DICVIV_00632 Dictyocaulus viviparus DICVIV_00632 N 0.000
nDi.2.2.2.g07634 Dirofilaria immitis nDi.2.2.2.g07634 N 0.000
GPUH_0001628601 Gongylonema pulchrum GPUH_0001628601 N 0.000
HCOI00011100 Haemonchus contortus HCOI00011100 N 0.000
HCOI00340600 Haemonchus contortus HCOI00340600 N 0.000
HPLM_0001619301 Haemonchus placei HPLM_0001619301 N 0.000
HPBE_0002631501 Heligmosomoides bakeri HPBE_0002631501 N 0.000
nLs.2.1.2.g07567 Litomosoides sigmodontis nLs.2.1.2.g07567 N 0.000
LOAG_08235 Loa loa LOAG_08235 N 0.000
NECAME_08819 Necator americanus NECAME_08819 N 0.000
NBR_0001570201 Nippostrongylus brasiliensis NBR_0001570201 N 0.000
OFLC_0001050101 Onchocerca flexuosa OFLC_0001050101 N 0.000
nOo.2.0.1.g05364 Onchocerca ochengi nOo.2.0.1.g05364 N 0.000
WBGene00246599 Onchocerca volvulus WBGene00246599 N 0.000
scaffold516-EXSNAP2012.12 Pristionchus exspectatus scaffold516-EXSNAP2012.12 N 0.000
PPA14638 Pristionchus pacificus PPA14638 N 0.000
TELCIR_02717 Teladorsagia circumcincta TELCIR_02717 N 0.000
WUBG_17286 Wuchereria bancrofti WUBG_17286 N 0.000