CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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IRF7
(
Pan troglodytes
)
IRF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00605 (IRF)
IPR001346
ENSPTRG00000003126
T244347_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
IRF7
M03337_2.00
Homo sapiens
HCGAAAVYGAAAVT
ABTTTCRBTTTCGD
SELEX
Jolma et al.(2013)
IRF7_1
1.000
1.000
IRF7
M03338_2.00
Homo sapiens
RAANCGAAAWTCGNTTY
RAANCGAWTTTCGNTTY
SELEX
Jolma et al.(2013)
IRF7_2
1.000
1.000
IRF7
M05547_2.00
Homo sapiens
NCGAAAVYGAAANYN
NRNTTTCRBTTTCGN
SELEX
Yin et al.(2017)
IRF7_eDBD_HT-SELEX
1.000
1.000
IRF7
M09238_2.00
Homo sapiens
RAAASYRAAW
WTTYRSTTTY
Misc
Kulakovskiy et al.(2013)
IRF7_HUMAN.H11MO.0.C
1.000
1.000
IRF7
M10894_2.00
Homo sapiens
NNSGAAWNYGAAANYBDV
BHVRNTTTCRNWTTCSNN
Transfac
Matys et al.(2006)
V$IRF7_01
1.000
1.000
IRF7
M05548_2.00
Homo sapiens
NNGAAARTGAAAVYR
YRBTTTCAYTTTCNN
SELEX
Yin et al.(2017)
IRF7_eDBD_Methyl-HT-SELEX
1.000
1.000
Irf7
M02255_2.00
Mus musculus
DAHNNGAAAN
NTTTCNNDTH
PBM
Weirauch et al.(2014)
pTH3475
0.769
0.769
Irf7
M09244_2.00
Mus musculus
RAAASYRAAW
WTTYRSTTTY
Misc
Kulakovskiy et al.(2013)
IRF7_MOUSE.H11MO.0.C
0.769
0.769
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSPTRP00000005508
IRF
13
125
LFGEWLLGEISSGCYEGLQWLDEARTCFRVPWKHFARKDLSEADARIFKAWAVARGRWPPSSRGGDPPPEAETAERAGWKTNFRCALRSTRRFVMLRDNSGDPADPHKVYALS
Links
Other
IRF
family TFs
Other
Pan troglodytes
TFs
28 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ENSAMXG00000004859
Astyanax mexicanus
ENSAMXG00000004859
I
znf740b
Danio rerio
ENSDARG00000061174
I
ENSFALG00000004356
Ficedula albicollis
ENSFALG00000004356
I
ENSGMOG00000018005
Gadus morhua
ENSGMOG00000018005
N
znf740b
Gasterosteus aculeatus
ENSGACG00000009456
N
Gfo_R004393
Geospiza fortis
Gfo_R004393
I
ENSLOCG00000006558
Lepisosteus oculatus
ENSLOCG00000006558
I
ENSONIG00000012259
Oreochromis niloticus
ENSONIG00000012259
N
ENSPFOG00000001571
Poecilia formosa
ENSPFOG00000001571
N
ENSPFOG00000001757
Poecilia formosa
ENSPFOG00000001757
I
znf740b
Takifugu rubripes
ENSTRUG00000001712
N
znf740b
Tetraodon nigroviridis
ENSTNIG00000015044
N
znf740.S
Xenopus laevis
XB-GENE-1219015
I
znf740
Xenopus tropicalis
XB-GENE-1219010
I
ENSXMAG00000008098
Xiphophorus maculatus
ENSXMAG00000008098
N