ENSSTOG00000022900 (Ictidomys tridecemlineatus)
IRF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00605 (IRF) IPR001346 ENSSTOG00000022900 T244399_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
IRF3
M03331_2.00 		Homo sapiens
NNRRAANGGAAACCGAAACYR
YRGTTTCGGTTTCCNTTYYNN		 SELEX
Jolma et al.(2013)
IRF3_1 		0.923 0.923
IRF3
M05531_2.00 		Homo sapiens
DCVGTTTCSNSGAAACCGMAASN
NSTTKCGGTTTCSNSGAAACBGH		 SELEX
Yin et al.(2017)
IRF3_eDBD_HT-SELEX 		0.923 0.923
IRF3
M05533_2.00 		Homo sapiens
HSGAAAVBGAAACYGAAACN
NGTTTCRGTTTCVBTTTCSD		 SELEX
Yin et al.(2017)
IRF3_FL_HT-SELEX 		0.923 0.923
IRF3
M09234_2.00 		Homo sapiens
RRRARDGAAAVDGRAASNRA
TYNSTTYCHBTTTCHYTYYY		 Misc
Kulakovskiy et al.(2013)
IRF3_HUMAN.H11MO.0.B 		0.923 0.923
IRF3
M10883_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$IRF3_Q3 		0.923 0.923
IRF3
M05532_2.00 		Homo sapiens
KCDSTTTCCHGGAAAMNRAWAV
BTWTYNKTTTCCDGGAAASHGM		 SELEX
Yin et al.(2017)
IRF3_eDBD_Methyl-HT-SELEX 		0.923 0.923
IRF3
M05534_2.00 		Homo sapiens
HGGAAABBGAAASBGAAASN
NSTTTCVSTTTCVVTTTCCD		 SELEX
Yin et al.(2017)
IRF3_FL_Methyl-HT-SELEX 		0.923 0.923
Irf3
M00174_2.00 		Mus musculus
RDWNBGMAAS
STTKCVNWHY		 PBM
Badis et al.(2009)
Irf3_3985 		0.913 0.913
Irf3
M09241_2.00 		Mus musculus
RRRARDGAAAVDGRAASNRA
TYNSTTYCHBTTTCHYTYYY		 Misc
Kulakovskiy et al.(2013)
IRF3_MOUSE.H11MO.0.A 		0.913 0.913
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSSTOP00000018572 IRF 7 110

Links

Other IRF family TFs
Other Ictidomys tridecemlineatus TFs

34 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ACYPI061631 Acyrthosiphon pisum ACYPI061631 N
Alligator_sinensis_CCG005376.1 Alligator sinensis Alligator_sinensis_CCG005376.1 N
ACUA026846 Anopheles culicifacies ACUA026846 N
Cmyd_10006886 Chelonia mydas Cmyd_10006886 N
csin111503 Clonorchis sinensis csin111503 N
ENSMEUG00000001401 Macropus eugenii ENSMEUG00000001401 N
maker-nMf.1.1.scaf05338-augustus-gene-0.5 Meloidogyne floridensis maker-nMf.1.1.scaf05338-augustus-gene-0.5 N
HOXD12 Otolemur garnettii ENSOGAG00000015689 N
Pvit_07422 Pogona vitticeps Pvit_07422 N
PXEA_0001880101 Protopolystoma xenopodis PXEA_0001880101 I
nRc.2.0.1.g42753 Romanomermis culicivorax nRc.2.0.1.g42753 N
C_01049 Schistosoma haematobium C_01049 N
Sjc_0133190 Schistosoma japonicum Sjc_0133190 N
Smp_087070 Schistosoma mansoni Smp_087070 N
SMTD_0000803701 Schistosoma mattheei SMTD_0000803701 N
TASK_0000335401 Taenia asiatica TASK_0000335401 N
Tal_R007628 Tyto alba Tal_R007628 N
hoxd9.S Xenopus laevis XB-GENE-485796 I
hoxd10.L Xenopus laevis XB-GENE-485208 I