Alligator_sinensis_CCG005376.1 (Alligator sinensis)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00046 (Homeobox) IPR001356 Alligator_sinensis_CCG005376.1 T225188_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Alligator_sinensis_CCG005376.1 Homeodomain 200 245

Links

Other Homeodomain family TFs
Other Alligator sinensis TFs

43 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Cmyd_10006886 Chelonia mydas Cmyd_10006886 N 0.816
Pvit_07422 Pogona vitticeps Pvit_07422 N 0.816
HOXD12 Otolemur garnettii ENSOGAG00000015689 N 0.765
Sjc_0117080 Schistosoma japonicum Sjc_0117080 N 0.737
maker-nMf.1.1.scaf05338-augustus-gene-0.5 Meloidogyne floridensis maker-nMf.1.1.scaf05338-augustus-gene-0.5 N 0.713
csin111503 Clonorchis sinensis csin111503 N 0.712
C_01049 Schistosoma haematobium C_01049 N 0.711
Sjc_0133190 Schistosoma japonicum Sjc_0133190 N 0.711
Smp_087070 Schistosoma mansoni Smp_087070 N 0.711
SMTD_0000803701 Schistosoma mattheei SMTD_0000803701 N 0.711
ACUA026846 Anopheles culicifacies ACUA026846 N 0.709
nRc.2.0.1.g42753 Romanomermis culicivorax nRc.2.0.1.g42753 N 0.707
TASK_0000335401 Taenia asiatica TASK_0000335401 N 0.706
SPER_0002304201 Spirometra erinaceieuropaei SPER_0002304201 N 0.696
EuGene3000598 Heterobasidion annosum EuGene3000598 N 0.675
HETIRDRAFT_320886 Heterobasidion irregulare HETIRDRAFT_320886 N 0.675
HmN_000399900 Hymenolepis microstoma HmN_000399900 N 0.666
HelroG91488 Helobdella robusta HelroG91488 N 0.648
SCLCIDRAFT_821214 Scleroderma citrinum SCLCIDRAFT_821214 N 0.634
M404DRAFT_217469 Pisolithus tinctorius M404DRAFT_217469 N 0.634
A_02618 Schistosoma haematobium A_02618 N 0.632
ACAC_0000020101 Angiostrongylus cantonensis ACAC_0000020101 I 0.624
JAAARDRAFT_49688 Jaapia argillacea JAAARDRAFT_49688 N 0.620
TRE_0001429201 Trichobilharzia regenti TRE_0001429201 I 0.617
Minc08686 Meloidogyne incognita Minc08686 N 0.616
ACOC_0000642101 Angiostrongylus costaricensis ACOC_0000642101 N 0.614
Alligator_sinensis_CCG019716.1 Alligator sinensis Alligator_sinensis_CCG019716.1 I 0.612
BGLB007215 Biomphalaria glabrata BGLB007215 I 0.611
ISCW005966 Ixodes scapularis ISCW005966 I 0.606
HDID_0000675101 Hymenolepis diminuta HDID_0000675101 N 0.606
Hba_18080 Heterorhabditis bacteriophora Hba_18080 N 0.603
e_gw.260.85.1 Branchiostoma floridae e_gw.260.85.1 N 0.602
ENSOARG00000004347 Ovis aries ENSOARG00000004347 I 0.600
Bm2445 Brugia malayi Bm2445 I 0.600
TCLT_0000843001 Thelazia callipaeda TCLT_0000843001 I 0.600
BTMF_0000989001 Brugia timori BTMF_0000989001 I 0.600
EEL_0001069601 Elaeophora elaphi EEL_0001069601 I 0.600
EVEC_0000078301 Enterobius vermicularis EVEC_0000078301 I 0.600
WUBG_01256 Wuchereria bancrofti WUBG_01256 I 0.600
GPUH_0000172001 Gongylonema pulchrum GPUH_0000172001 I 0.600
nLs.2.1.2.g07662 Litomosoides sigmodontis nLs.2.1.2.g07662 I 0.600
nOo.2.0.1.g04757 Onchocerca ochengi nOo.2.0.1.g04757 I 0.600
PXEA_0000761101 Protopolystoma xenopodis PXEA_0000761101 I 0.600