MLOC_14305 (Hordeum vulgare)
Leafy

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF01698 (FLO_LFY) IPR002910 MLOC_14305 T244714_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
LFY
M02692_2.00 		Arabidopsis thaliana
YWTKRACCRSYGGTYMAWR
YWTKRACCRSYGGTYMAWR		 SELEX
Mathelier et al.(2014)
MA0590.1 		0.812 0.812
LFY
M10895_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$LFY_Q2 		0.812 0.812
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
MLOC_14305.1 Leafy 1 323
MLOC_14305.2 Leafy 2 119
MLOC_14305.3 Leafy 2 138

Links

Other Leafy family TFs
Other Hordeum vulgare TFs

35 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
F775_25467 Aegilops tauschii F775_25467 N 0.894
Aquca_043_00044 Aquilegia coerulea Aquca_043_00044 I 0.741
Bostr.26833s0050 Boechera stricta Bostr.26833s0050 I 0.727
BRADI5G20340 Brachypodium distachyon BRADI5G20340 I 0.864
Bo3g109270 Brassica oleracea Bo3g109270 I 0.804
Bo2g161690 Brassica oleracea Bo2g161690 I 0.804
Bra029305 Brassica rapa Bra029305 I 0.804
PK10917.1 Cannabis sativa PK10917.1 I 0.700
Cagra.4553s0022 Capsella grandiflora Cagra.4553s0022 I 0.742
Carubv10028602m.g Capsella rubella Carubv10028602m.g I 0.742
Ca_01386 Cicer arietinum Ca_01386 I 0.727
Ciclev10033942m.g Citrus clementina Ciclev10033942m.g I 0.712
orange1.1g044766m.g Citrus sinensis orange1.1g044766m.g I 0.712
Cucsa.156880 Cucumis sativus Cucsa.156880 I 0.759
Thhalv10005606m.g Eutrema salsugineum Thhalv10005606m.g I 0.742
Gorai.001G053900 Gossypium raimondii Gorai.001G053900 I 0.812
LPERR04G19570 Leersia perrieri LPERR04G19570 I 0.848
Lus10022427.g Linum usitatissimum Lus10022427.g I 0.788
Lus10016732.g Linum usitatissimum Lus10016732.g I 0.786
chr1.CM0094.750.nd Lotus japonicus chr1.CM0094.750.nd I 0.754
cassava40548.m1 Manihot esculenta cassava40548.m1 I 0.812
mgf020579m Mimulus guttatus mgf020579m I 0.712
mgf013601m Mimulus guttatus mgf013601m I 0.727
OB09G10150 Oryza brachyantha OB09G10150 N 0.718
OB04G30790 Oryza brachyantha OB04G30790 I 0.833
Pavir.Ga00621 Panicum virgatum Pavir.Ga00621 I 0.833
Pavir.Gb00795 Panicum virgatum Pavir.Gb00795 I 0.848
FL Populus trichocarpa POPTR_0015s11820 I 0.712
Solyc03g118160.1 Solanum lycopersicum Solyc03g118160.1 I 0.712
Sb06g027340 Sorghum bicolor Sb06g027340 I 0.833
Traes_2BL_8DEC0EFBF Triticum aestivum Traes_2BL_8DEC0EFBF I 0.864
Traes_2AL_83D0D0C3F Triticum aestivum Traes_2AL_83D0D0C3F I 0.864
GRMZM2G180190 Zea mays GRMZM2G180190 I 0.833
GRMZM2G098813 Zea mays GRMZM2G098813 I 0.788