CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Traes_2BL_8DEC0EFBF
(
Triticum aestivum
)
Leafy
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF01698 (FLO_LFY)
IPR002910
Traes_2BL_8DEC0EFBF
T244751_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
LFY
M02692_2.00
Arabidopsis thaliana
YWTKRACCRSYGGTYMAWR
YWTKRACCRSYGGTYMAWR
SELEX
Mathelier et al.(2014)
MA0590.1
0.798
0.798
LFY
M10895_2.00
Arabidopsis thaliana
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$LFY_Q2
0.798
0.798
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Traes_2BL_8DEC0EFBF.2
Leafy
1
381
MDPNDAFLAAHPFRWDLGPPAPAAVPPPPPPPPLPPALPPANAPRELEDLVVGYGVRASTVARISELGFTASTLLVMTESELDDMTAALAGLFRWDLLIGERFGLRAALRAERGRLMSPGCRHHGYQSGSTIDGASQEGDYKLLSNERDGAASGGIGEDDAMRMMASGKKQKNGSAARKAKKARRNKVKELRLDMQGDEHEDGGGGRSESTESSAGGVGGERQREHPFVVTEPGEVARAKKNGLDYLFHLYEQCRLFLLQVQSMAKLHGQKSPTKVTNQVFRYASKVGASYINKPKMRHYVHCYALHCLDEDASDALRRAYKARGENVGAWRQACYAPLVDIAARHGFDIDAVFAAHPRLAIWYVPTRLRQLCHQARSAHD
Links
Other
Leafy
family TFs
Other
Triticum aestivum
TFs
62 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
BRADI1G19702
Brachypodium distachyon
BRADI1G19702
I
LPERR07G21050
Leersia perrieri
LPERR07G21050
I
OBART07G24080
Oryza barthii
OBART07G24080
I
ORGLA07G0187400
Oryza glaberrima
ORGLA07G0187400
I
OGLUM07G24220
Oryza glumaepatula
OGLUM07G24220
I
BGIOSGA026248
Oryza indica
BGIOSGA026248
I
OLONG_012651
Oryza longistaminata
OLONG_012651
I
OMERI07G20490
Oryza meridionalis
OMERI07G20490
I
ONIVA07G23980
Oryza nivara
ONIVA07G23980
I
OPUNC07G22690
Oryza punctata
OPUNC07G22690
I
ORUFI07G25260
Oryza rufipogon
ORUFI07G25260
I
BZIP60
Oryza sativa
OS07G0644100
I
Pavir.Ba00049
Panicum virgatum
Pavir.Ba00049
I
Pavir.J09096
Panicum virgatum
Pavir.J09096
I
Si029351m.g
Setaria italica
Si029351m.g
I
Sb02g041070
Sorghum bicolor
Sb02g041070
I