cassava19992.m1 (Manihot esculenta)
Leafy

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF01698 (FLO_LFY) IPR002910 cassava19992.m1 T244766_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
LFY
M02692_2.00 		Arabidopsis thaliana
YWTKRACCRSYGGTYMAWR
YWTKRACCRSYGGTYMAWR		 SELEX
Mathelier et al.(2014)
MA0590.1 		0.881 0.881
LFY
M10895_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$LFY_Q2 		0.881 0.881
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
cassava19992.m1 Leafy 1 367

Links

Other Leafy family TFs
Other Manihot esculenta TFs

66 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
LPERR04G13880 Leersia perrieri LPERR04G13880 N
OBART04G17300 Oryza barthii OBART04G17300 N
OB04G24520 Oryza brachyantha OB04G24520 N
ORGLA04G0144200 Oryza glaberrima ORGLA04G0144200 N
ONIVA04G15600 Oryza nivara ONIVA04G15600 N
ORUFI04G18730 Oryza rufipogon ORUFI04G18730 N