cassava40548.m1 (Manihot esculenta)
Leafy

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF01698 (FLO_LFY) IPR002910 cassava40548.m1 T244767_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
LFY
M02692_2.00 		Arabidopsis thaliana
YWTKRACCRSYGGTYMAWR
YWTKRACCRSYGGTYMAWR		 SELEX
Mathelier et al.(2014)
MA0590.1 		0.893 0.893
LFY
M10895_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$LFY_Q2 		0.893 0.893
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
cassava40548.m1 Leafy 1 367

Links

Other Leafy family TFs
Other Manihot esculenta TFs

71 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSAMXG00000002769 Astyanax mexicanus ENSAMXG00000002769 N 0.000
ENSCSAG00000000974 Chlorocebus sabaeus ENSCSAG00000000974 N 0.000
ZNF683 Gorilla gorilla ENSGGOG00000007713 N 0.000
ZNF683 Homo sapiens ENSG00000176083 N 0.000
ZNF683 Macaca mulatta ENSMMUG00000003420 N 0.000
ENSONIG00000013583 Oreochromis niloticus ENSONIG00000013583 N 0.000
ENSORLG00000010025 Oryzias latipes ENSORLG00000010025 N 0.000
ZNF683 Pan troglodytes ENSPTRG00000000383 N 0.000
ENSPANG00000022867 Papio anubis ENSPANG00000022867 N 0.000
ENSPPYG00000001685 Pongo abelii ENSPPYG00000001685 N 0.000
ENSTRUG00000005618 Takifugu rubripes ENSTRUG00000005618 N 0.000