CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
mgf013601m
(
Mimulus guttatus
)
Leafy
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF01698 (FLO_LFY)
IPR002910
mgf013601m
T244776_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
LFY
M02692_2.00
Arabidopsis thaliana
YWTKRACCRSYGGTYMAWR
YWTKRACCRSYGGTYMAWR
SELEX
Mathelier et al.(2014)
MA0590.1
0.887
0.887
LFY
M10895_2.00
Arabidopsis thaliana
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$LFY_Q2
0.887
0.887
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
mgf013601m
Leafy
1
388
MDPDAFSASLFKWDPRGAMPPTNRLLEAVLPPPPPPPSSAYSVRPRELGGLEELFQAYGIRYYTAAKIAELGFTVNTLLDMRDEELEEMMNSLCQIFRWDLLVGERYGIKAAVRAERRRLDDEEARRRHLLCGDATTHHALDALSQEGLSEEPVQQQEKEAAGSGGGGVWEMVVAAGGRKQQRRRKNCRGRSRMAASMDDDDDDDDDETEGAEDDENCGGGGGGGGSERQREHPFIVTEPGEVARGKKNGLDYLFHLYEQCREFLIQVQNIAKERGEKCPTKVTNQVFRYAKKAGANYINKPKMRHYVHCYALHCLDEDTSNALRRAFKERGENVGAWRQACYKPLVAIAARQGWDIDAIFNAHPRLSIWYVPTKLRQLCHAERSCAA
Links
Other
Leafy
family TFs
Other
Mimulus guttatus
TFs
68 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
XM_002335238.1
Populus trichocarpa
POPTR_0019s02110
N
0.000
POPTR_0019s02130
Populus trichocarpa
POPTR_0019s02130
N
0.000
POPTR_0019s02180
Populus trichocarpa
POPTR_0019s02180
N
0.000
POPTR_0019s02190
Populus trichocarpa
POPTR_0019s02190
N
0.000
POPTR_0060s00240
Populus trichocarpa
POPTR_0060s00240
N
0.000
POPTR_0123s00220
Populus trichocarpa
POPTR_0123s00220
N
0.000
POPTR_0123s00230
Populus trichocarpa
POPTR_0123s00230
N
0.000
POPTR_0123s00240
Populus trichocarpa
POPTR_0123s00240
N
0.000
POPTR_0190s00220
Populus trichocarpa
POPTR_0190s00220
N
0.000
POPTR_0019s02060
Populus trichocarpa
POPTR_0019s02060
N
0.000
SapurV1A.4753s0010
Salix purpurea
SapurV1A.4753s0010
N
0.000
SapurV1A.2188s0010
Salix purpurea
SapurV1A.2188s0010
N
0.000
SapurV1A.2141s0020
Salix purpurea
SapurV1A.2141s0020
N
0.000
SapurV1A.1525s0010
Salix purpurea
SapurV1A.1525s0010
N
0.000
SapurV1A.1254s0010
Salix purpurea
SapurV1A.1254s0010
N
0.000
SapurV1A.1112s0010
Salix purpurea
SapurV1A.1112s0010
N
0.000
SapurV1A.0880s0030
Salix purpurea
SapurV1A.0880s0030
N
0.000
SapurV1A.0436s0160
Salix purpurea
SapurV1A.0436s0160
N
0.000
SapurV1A.0436s0070
Salix purpurea
SapurV1A.0436s0070
N
0.000
SapurV1A.0436s0020
Salix purpurea
SapurV1A.0436s0020
N
0.000
SapurV1A.0436s0010
Salix purpurea
SapurV1A.0436s0010
N
0.000