gene30750-v1.0-hybrid (Fragaria vesca)
Leafy

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF01698 (FLO_LFY) IPR002910 gene30750-v1.0-hybrid T244788_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
LFY
M02692_2.00 		Arabidopsis thaliana
YWTKRACCRSYGGTYMAWR
YWTKRACCRSYGGTYMAWR		 SELEX
Mathelier et al.(2014)
MA0590.1 		0.738 0.738
LFY
M10895_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$LFY_Q2 		0.738 0.738
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
mrna30750.1-v1.0-hybrid Leafy 1 364

Links

Other Leafy family TFs
Other Fragaria vesca TFs

37 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
A1O1_01832 Capronia coronata A1O1_01832 N
A1O3_00383 Capronia epimyces A1O3_00383 N
PV04_04618 Capronia semiimmersa PV04_04618 N
Z519_08371 Cladophialophora bantiana Z519_08371 N
G647_04039 Cladophialophora carrionii G647_04039 N
G647_05669 Cladophialophora carrionii G647_05669 N
PV07_05631 Cladophialophora immunda PV07_05631 N
A1O5_01092 Cladophialophora psammophila A1O5_01092 N
A1O7_04642 Cladophialophora yegresii A1O7_04642 N
HMPREF1541_10181 Cyphellophora europaea HMPREF1541_10181 N
A1O9_09700 Exophiala aquamarina A1O9_09700 N
A1O9_06683 Exophiala aquamarina A1O9_06683 N
HMPREF1120_03298 Exophiala dermatitidis HMPREF1120_03298 N
PV10_02880 Exophiala mesophila PV10_02880 N
PV10_06607 Exophiala mesophila PV10_06607 N
PV11_01810 Exophiala sideris PV11_01810 N
PV11_04485 Exophiala sideris PV11_04485 N
PV08_03235 Exophiala spinifera PV08_03235 N
PV08_11635 Exophiala spinifera PV08_11635 N
PV05_02243 Exophiala xenobiotica PV05_02243 N
Z517_06555 Fonsecaea pedrosoi Z517_06555 N
Z518_00766 Rhinocladiella mackenziei Z518_00766 N