chr1.CM0094.710.nd (Lotus japonicus)
Leafy

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF01698 (FLO_LFY) IPR002910 chr1.CM0094.710.nd T244803_2.00 Superfamily (2010-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
LFY
M02692_2.00 		Arabidopsis thaliana
YWTKRACCRSYGGTYMAWR
YWTKRACCRSYGGTYMAWR		 SELEX
Mathelier et al.(2014)
MA0590.1 		0.871 0.871
LFY
M10895_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$LFY_Q2 		0.871 0.871
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
chr1.CM0094.710.nd Leafy 1 85

Links

Other Leafy family TFs
Other Lotus japonicus TFs

9 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Aquca_043_00044 Aquilegia coerulea Aquca_043_00044 I 0.765
Bo2g161690 Brassica oleracea Bo2g161690 I 0.859
Bo3g109270 Brassica oleracea Bo3g109270 I 0.871
Bra029305 Brassica rapa Bra029305 I 0.859
Cucsa.156880 Cucumis sativus Cucsa.156880 I 0.871
Gorai.001G053900 Gossypium raimondii Gorai.001G053900 I 0.929
Lus10022427.g Linum usitatissimum Lus10022427.g I 0.871
cassava40548.m1 Manihot esculenta cassava40548.m1 I 0.929
PGSC0003DMG400014174 Solanum tuberosum PGSC0003DMG400014174 I 0.713